FAM207A

General Information

Gene Name : FAM207A
Gene ID : ENSG00000160256.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM207A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM207A	ENSG00000160256.12	1.08	4.04	2.56	ENCSR000AEF
HepG2	FAM207A	ENSG00000160256.12	37.10	11.67	24.39	ENCSR985KAT
K562	FAM207A	ENSG00000160256.12	13.69	5.54	9.62	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM207A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM207A RNA is bound by 31 proteins.

CanvasJS.com

eCLIP assay for FAM207A is not avaliable on ENCORE database.

31 proteins are bound to FAM207A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	46374028	46374135	+	intron-Distal	5.88051	13.99818	K562	EWSR1
chr21	46360114	46360307	+	intron-Distal,intron-Proximal	5.66710	13.82964	HepG2	EFTUD2
chr21	46374327	46374468	+	intron-Distal	5.88125	12.82111	K562	EWSR1
chr21	46391338	46391409	+	intron-Distal	4.55008	11.63297	HepG2	CSTF2T
chr21	46359964	46360103	+	5'-UTR,CDS,intron-Proximal	3.13828	11.10936	HepG2	DDX3X
chr21	46374195	46374269	+	intron-Distal	5.32424	10.18369	K562	EWSR1
chr21	46391661	46391769	+	intron-Distal	5.45241	10.18369	K562	EWSR1
chr21	46366396	46366464	+	intron-Distal	5.28367	10.03902	K562	NONO
chr21	46368590	46368670	+	intron-Distal	4.00526	9.66342	K562	EWSR1
chr21	46384139	46384239	+	intron-Distal	4.50495	9.60550	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 180 entries

eCLIP assay for FAM207A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM207A is not available on ENCORE database.
66 RBPs can affect the levels of FAM207A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.

66 RBPs can affect the gene expression of FAM207A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM207A	ENSG00000160256.8	735.19560	421.00740	0.80420	12.38590	11.11430	K562	DDX47
FAM207A	ENSG00000160256.8	395.56360	207.93350	0.92770	10.31450	9.22620	HepG2	CELF1
FAM207A	ENSG00000160256.8	143.80590	312.10960	-1.11790	9.83430	9.06620	HepG2	SRSF1
FAM207A	ENSG00000160256.8	478.30990	277.80100	0.78380	8.63830	7.67460	HepG2	UTP3
FAM207A	ENSG00000160256.8	254.93550	117.75310	1.11430	8.27180	7.16450	K562	PTBP1
FAM207A	ENSG00000160256.8	249.92930	116.82040	1.09710	7.66680	6.42040	K562	TARDBP
FAM207A	ENSG00000160256.8	285.18590	472.10350	-0.72720	7.36080	6.07940	K562	SF3A3
FAM207A	ENSG00000160256.8	205.89870	348.25650	-0.75820	6.86000	5.96490	HepG2	PUS1
FAM207A	ENSG00000160256.8	249.62140	112.69130	1.14730	7.22540	5.80380	K562	TIA1
FAM207A	ENSG00000160256.8	200.01720	102.32500	0.96690	6.49850	5.70000	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.

6 RBPs can affect the splicing of FAM207A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	FAM207A	ENSG00000160256.8	chr21	+	46363598	46363752			46363598	46363707	46380014	46380083	-0.17400	0.00008	0.03562	shorter	HepG2	HNRNPL
A5SS	FAM207A	ENSG00000160256.8	chr21	+	46363598	46363752			46363598	46363707	46380014	46380083	-0.31000	0.00063	0.03740	shorter	K562	U2AF2
MXE	FAM207A	ENSG00000160256.8	chr21	+	46363598	46363752	46380014	46380083	46359924	46360101	46386948	46387096	0.12800	0.00063	0.02620	1included	K562	AGGF1
SE	FAM207A	ENSG00000160256.8	chr21	+	46393111	46393180			46386948	46387096	46396594	46396888	-0.20700	0.00074	0.04032	excluded	HepG2	PTBP1
MXE	FAM207A	ENSG00000160256.8	chr21	+	46386948	46387096	46393111	46393180	46363598	46363752	46396594	46396904	-0.12800	0.00108	0.00979	2included	K562	AQR
SE	FAM207A	ENSG00000160256.8	chr21	+	46393111	46393180			46386948	46387096	46396594	46396888	-0.23300	0.00148	0.06478	excluded	HepG2	PCBP1
SE	FAM207A	ENSG00000160256.8	chr21	+	46393111	46393180			46386948	46387096	46396594	46396904	0.07700	0.01050	0.08448	included	K562	AQR

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM207A

General Information

Functions

Localization

Domains (AlphaFold: FAM207A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM207A is not avaliable on ENCORE database.

31 proteins are bound to FAM207A RNA:

eCLIP assay for FAM207A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.

66 RBPs can affect the gene expression of FAM207A :

The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.

6 RBPs can affect the splicing of FAM207A :

The Knockdown/knockout RNA-Seq assay for FAM207A is not avaliable on ENCORE database.