ERCC6L2

General Information

Gene Name : ERCC6L2
Gene ID : ENSG00000182150.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ERCC6L2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ERCC6L2	ENSG00000182150.15	17.12	15.55	16.34	ENCSR000AEF
HepG2	ERCC6L2	ENSG00000182150.15	14.16	17.77	15.96	ENCSR985KAT
K562	ERCC6L2	ENSG00000182150.15	11.85	14.58	13.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ERCC6L2 is not avaliable on ENCORE database.

Proteins bound to RNA

ERCC6L2 RNA is bound by 16 proteins.

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eCLIP assay for ERCC6L2 is not avaliable on ENCORE database.

16 proteins are bound to ERCC6L2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	98667336	98667370	+	intron-Distal	4.64028	32.53576	K562	XRCC6
chr9	98667318	98667336	+	intron-Distal	4.55546	31.26178	K562	XRCC6
chr9	98718199	98718302	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.05744	10.78406	HepG2	BCLAF1
chr9	98683521	98683595	+	CDS	3.61184	7.83567	HepG2	BCLAF1
chr9	98678508	98678622	+	CDS,intron-Proximal	3.33690	7.66871	HepG2	BCLAF1
chr9	98677947	98678011	+	CDS,intron-Proximal	4.35982	7.53358	HepG2	BCLAF1
chr9	98669363	98669457	+	CDS	3.07459	7.20615	HepG2	BCLAF1
chr9	98683454	98683518	+	CDS,intron-Proximal	4.38559	6.65960	HepG2	BCLAF1
chr9	98660198	98660251	+	CDS	4.96914	6.58593	HepG2	BCLAF1
chr9	98662944	98663088	+	intron-Distal	4.63130	6.27552	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 39 entries

eCLIP assay for ERCC6L2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ERCC6L2 is not available on ENCORE database.
62 RBPs can affect the levels of ERCC6L2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ERCC6L2 is not available on ENCORE database.

62 RBPs can affect the gene expression of ERCC6L2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ERCC6L2	ENSG00000182150.11	256.26350	520.44600	-1.02210	13.51820	12.36680	K562	AGGF1
ERCC6L2	ENSG00000182150.11	277.48750	523.29160	-0.91520	10.71630	9.57260	K562	RBM15
ERCC6L2	ENSG00000182150.11	600.13820	304.94130	0.97670	11.23150	9.55270	K562	EIF4A3
ERCC6L2	ENSG00000182150.11	655.92830	385.47790	0.76680	8.08460	6.98380	HepG2	RBM25
ERCC6L2	ENSG00000182150.11	305.00880	541.53350	-0.82820	8.05920	6.88820	K562	AKAP8L
ERCC6L2	ENSG00000182150.11	161.55530	350.98130	-1.11940	7.74770	6.54610	HepG2	XRN2
ERCC6L2	ENSG00000182150.11	279.37490	494.24040	-0.82300	6.87160	5.79850	HepG2	TARDBP
ERCC6L2	ENSG00000182150.11	749.66090	455.11020	0.71990	6.65480	5.69370	HepG2	U2AF1
ERCC6L2	ENSG00000182150.11	444.39590	696.08040	-0.64740	5.88330	4.61220	K562	PPIG
ERCC6L2	ENSG00000182150.11	358.68050	574.75190	-0.68020	5.89960	4.59080	K562	KIF1C
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 64 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ERCC6L2 is not available on ENCORE database.

4 RBPs can affect the splicing of ERCC6L2 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ERCC6L2	ENSG00000182150.11	chr9	+	98729740	98729907	98728843	98728996	98732857	98732938	0.63800	0.00000	0.00000	included	HepG2	U2AF2
SE	ERCC6L2	ENSG00000182150.11	chr9	+	98729740	98729907	98728751	98728996	98732857	98732938	0.32600	0.00005	0.01273	included	K562	NSUN2
SE	ERCC6L2	ENSG00000182150.11	chr9	+	98729740	98729907	98728843	98728996	98732857	98732938	0.29900	0.00010	0.00285	included	HepG2	U2AF1
SE	ERCC6L2	ENSG00000182150.11	chr9	+	98733825	98733877	98732857	98732938	98734214	98734250	0.26300	0.00429	0.06712	included	K562	SRSF1
SE	ERCC6L2	ENSG00000182150.11	chr9	+	98733825	98733877	98732857	98732938	98734214	98734250	-0.23800	0.00633	0.06402	excluded	HepG2	U2AF2

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ERCC6L2

General Information

Functions

Localization

Domains (AlphaFold: ERCC6L2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ERCC6L2 is not avaliable on ENCORE database.

16 proteins are bound to ERCC6L2 RNA:

eCLIP assay for ERCC6L2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ERCC6L2 is not available on ENCORE database.

62 RBPs can affect the gene expression of ERCC6L2 :

The Knockdown/knockout RNA-Seq assay for ERCC6L2 is not available on ENCORE database.

4 RBPs can affect the splicing of ERCC6L2 :

The Knockdown/knockout RNA-Seq assay for ERCC6L2 is not avaliable on ENCORE database.