CMC2

General Information

Gene Name : CMC2
Gene ID : ENSG00000103121.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CMC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CMC2	ENSG00000103121.8	54.79	63.64	59.22	ENCSR000AEF
HepG2	CMC2	ENSG00000103121.8	111.76	100.12	105.94	ENCSR985KAT
K562	CMC2	ENSG00000103121.8	184.30	115.59	149.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CMC2 is not avaliable on ENCORE database.

Proteins bound to RNA

CMC2 RNA is bound by 20 proteins.

CanvasJS.com

eCLIP assay for CMC2 is not avaliable on ENCORE database.

20 proteins are bound to CMC2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	81032860	81032905	-	intron-Distal	6.08121	35.02994	K562	EXOSC5
chr16	81040337	81040480	-	5'-UTR,intron-Distal,intron-Proximal	3.73759	32.59303	K562	DDX3X
chr16	81032670	81032711	-	intron-Distal	5.99782	29.01655	K562	EXOSC5
chr16	81033257	81033327	-	intron-Distal	5.78252	26.69096	K562	EXOSC5
chr16	81032635	81032670	-	intron-Distal,intron-Proximal	6.65085	25.38070	K562	EXOSC5
chr16	81032905	81032932	-	intron-Distal	5.67773	25.02702	K562	EXOSC5
chr16	81033343	81033394	-	intron-Distal	4.96838	21.22611	K562	EXOSC5
chr16	81033569	81033604	-	intron-Distal	6.31437	20.00565	K562	EXOSC5
chr16	81033604	81033629	-	intron-Distal	5.02922	15.79894	K562	EXOSC5
chr16	81032612	81032681	-	intron-Distal,intron-Proximal	4.51506	14.77102	K562	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 65 entries

eCLIP assay for CMC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CMC2 is not available on ENCORE database.
65 RBPs can affect the levels of CMC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CMC2 is not available on ENCORE database.

65 RBPs can affect the gene expression of CMC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CMC2	ENSG00000103121.4	1975.55510	806.15090	1.29300	27.67500	25.94300	K562	PUS1
CMC2	ENSG00000103121.4	1396.96440	781.14650	0.83850	19.52710	18.13600	K562	AGGF1
CMC2	ENSG00000103121.4	1468.71680	785.41670	0.90290	19.40590	17.79930	K562	RBM15
CMC2	ENSG00000103121.4	1307.76580	812.80890	0.68600	8.74470	7.51330	K562	AKAP8L
CMC2	ENSG00000103121.4	576.07870	852.16830	-0.56490	8.73480	7.51120	K562	NSUN2
CMC2	ENSG00000103121.4	1051.97670	1678.49660	-0.67410	8.29110	7.36370	K562	AQR
CMC2	ENSG00000103121.4	1239.05310	677.34190	0.87120	8.25020	6.40770	K562	NAA15
CMC2	ENSG00000103121.4	259.36590	482.10110	-0.89430	7.40770	6.35900	HepG2	IGF2BP2
CMC2	ENSG00000103121.4	627.62010	903.57330	-0.52580	7.02540	5.93950	K562	UPF1
CMC2	ENSG00000103121.4	1314.39660	862.62640	0.60750	6.88160	5.44170	K562	KIF1C
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 77 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CMC2 is not available on ENCORE database.

31 RBPs can affect the splicing of CMC2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81009697	81010076	81030918	81032554	0.10700	0.00010	included	K562	SRSF1
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81014374	81014484	81030918	81032554	-0.21800	0.00001	excluded	K562	SF3B4
SE	CMC2	ENSG00000103121.4	chr16	-	81034852	81034939	81030918	81031034	81040338	81040463	0.17200	0.00000	included	HepG2	U2AF1
SE	CMC2	ENSG00000103121.4	chr16	-	81031889	81031956	81030918	81031034	81040338	81040444	0.37800	0.00000	included	HepG2	U2AF2
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81009697	81010076	81030918	81032554	-0.14800	0.00000	excluded	K562	PUS1
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81009697	81010076	81030918	81032554	-0.18100	0.00048	excluded	K562	EFTUD2
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81009697	81010076	81030918	81032554	-0.26900	0.00000	excluded	K562	U2AF1
SE	CMC2	ENSG00000103121.4	chr16	-	81025358	81025562	81015410	81015482	81030918	81031034	0.05200	0.00016	included	K562	HNRNPL
SE	CMC2	ENSG00000103121.4	chr16	-	81031889	81031959	81030918	81031034	81040338	81040480	0.15600	0.00000	included	K562	U2AF2
SE	CMC2	ENSG00000103121.4	chr16	-	81015410	81015482	81009697	81010076	81030918	81032554	-0.24900	0.00000	excluded	K562	U2AF2

Showing 1 to 10 of 66 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CMC2

General Information

Functions

Localization

Domains (AlphaFold: CMC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CMC2 is not avaliable on ENCORE database.

20 proteins are bound to CMC2 RNA:

eCLIP assay for CMC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CMC2 is not available on ENCORE database.

65 RBPs can affect the gene expression of CMC2 :

The Knockdown/knockout RNA-Seq assay for CMC2 is not available on ENCORE database.

31 RBPs can affect the splicing of CMC2 :

The Knockdown/knockout RNA-Seq assay for CMC2 is not avaliable on ENCORE database.