CHD1

General Information

Gene Name       : CHD1
Gene ID             : ENSG00000153922.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CHD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHD1ENSG00000153922.1077.8169.1873.50ENCSR000AEF
HepG2CHD1ENSG00000153922.1019.8337.3328.58ENCSR985KAT
K562CHD1ENSG00000153922.1040.7861.0950.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHD1 RNA is bound by 26 proteins.  







eCLIP assay for CHD1 is not avaliable on ENCORE database.





26 proteins are bound to CHD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr59819139298191471-3'-UTR,intron-Distal,intron-Proximal5.65777400.00000K562PUM2
chr59819147598191546-3'-UTR,intron-Distal5.5124749.33373K562PUM2
chr59819156898191604-3'-UTR,intron-Distal3.901277.82982K562PUM2
chr59819574898195785-3'-UTR,CDS,intron-Distal,intron-Proximal4.371863.35169HepG2U2AF2
chr59819137798191453-3'-UTR,intron-Distal,intron-Proximal5.146099.28899K562TIA1
chr59819168198191716-3'-UTR,intron-Distal5.6220315.30625K562PUM2
chr59819199198192057-3'-UTR,intron-Distal,intron-Proximal5.409279.93069K562IGF2BP1
chr59819465598194722-3'-UTR,CDS,intron-Distal,intron-Proximal4.422564.92499HepG2AQR
chr59819471198194767-3'-UTR,CDS,intron-Distal,intron-Proximal4.162134.42765K562SF3B4
chr59826221498262238-5'-UTR,intron-Distal6.1338412.01365K562SF3B4
chr59821677998216818-CDS,intron-Distal,intron-Proximal4.6121913.85602HepG2BCLAF1
chr59821677998216818-CDS,intron-Distal,intron-Proximal4.5583614.12560K562UCHL5
chr59821541598215432-CDS,intron-Distal3.374207.25129K562UCHL5
chr59822390798223963-CDS,intron-Distal,intron-Proximal3.447863.16095HepG2U2AF2
chr59823437498234412-CDS,intron-Distal4.1033510.57284K562UCHL5
chr59821538698215432-CDS,intron-Distal5.0835513.49474HepG2BCLAF1
chr59821677998216815-CDS,intron-Distal,intron-Proximal3.050694.85577K562ZNF622
chr59822485898224938-CDS,intron-Distal3.977123.11282HepG2G3BP1
chr59823519598235215-CDS,intron-Distal3.688314.74268K562UCHL5
chr59821541798215470-CDS,intron-Distal,intron-Proximal5.009484.28841HepG2BUD13
chr59821681898216860-CDS,intron-Distal,intron-Proximal3.423018.10543K562UCHL5
chr59821888498218909-CDS,intron-Distal3.091257.08726K562ZNF622
chr59823859798238669-CDS,intron-Distal,intron-Proximal3.131234.85880HepG2PPIG
chr59820644498206487-CDS,intron-Distal,intron-Proximal3.460647.42278HepG2BCLAF1
chr59823441298234441-CDS,intron-Distal3.781099.79481K562UCHL5
chr59821213198212195-CDS,intron-Distal3.122853.56099K562TRA2A
chr59821530698215381-CDS,intron-Distal3.525204.41873K562ZNF800
chr59823956798239604-CDS,intron-Distal3.576137.10975K562UCHL5
chr59823297498233004-CDS,intron-Distal4.381367.53358HepG2BCLAF1
chr59822489098224936-CDS,intron-Distal3.682277.83567HepG2BCLAF1
chr59820426998204332-CDS,intron-Distal,intron-Proximal3.701179.56042K562ZNF622
chr59822917398229199-CDS,intron-Distal4.197496.22576HepG2BCLAF1
chr59821683598216872-CDS,intron-Distal,intron-Proximal3.9501111.29515HepG2BCLAF1
chr59823296698233008-CDS,intron-Distal3.374907.21479K562UCHL5
chr59820426698204341-CDS,intron-Distal,intron-Proximal3.727424.49016HepG2FXR2
chr59821768098217745-CDS,intron-Distal4.6927922.54186K562ZNF622
chr59826203898262083-CDS,intron-Distal3.258288.77086HepG2BCLAF1
chr59823864598238668-CDS,intron-Distal4.2304415.15889K562ZNF622
chr59822482798224874-CDS,intron-Distal4.585158.41475HepG2BCLAF1
chr59821215998212233-CDS,intron-Distal3.8630610.01989K562ZNF622
chr59821526798215350-CDS,intron-Distal3.358953.31144K562TRA2A
chr59821698398217016-CDS,intron-Distal3.554596.98424K562UCHL5
chr59824069398240740-CDS,intron-Distal3.163566.93682K562UCHL5
chr59823439198234460-CDS,intron-Distal3.471744.88910K562ZNF800
chr59820546098205518-CDS,intron-Distal3.833107.83567HepG2BCLAF1
chr59823525298235307-CDS,intron-Distal4.2646312.34066K562UCHL5
chr59822373298223813-CDS,intron-Distal,intron-Proximal3.888925.85201K562PRPF8
chr59820546098205498-CDS,intron-Distal5.231108.87880K562ZNF622
chr59823411198234137-CDS,intron-Distal4.228306.84316HepG2BCLAF1
chr59823699998237031-CDS,intron-Distal5.326268.86847HepG2BCLAF1
chr59823405198234101-CDS,intron-Distal3.730927.83567HepG2BCLAF1
chr59821769498217739-CDS,intron-Distal3.7186212.18505HepG2BCLAF1
chr59823654998236685-CDS,intron-Distal3.5869618.89408K562ZNF622
chr59826203798262091-CDS,intron-Distal4.168017.95479K562ZNF622
chr59820545798205509-CDS,intron-Distal,intron-Proximal4.1961310.57284K562UCHL5
chr59823863898238664-CDS,intron-Distal3.315895.91405HepG2BCLAF1
chr59821216798212238-CDS,intron-Distal3.7557810.27359K562UCHL5
chr59823863998238669-CDS,intron-Distal,intron-Proximal3.008755.07870K562GRWD1
chr59823525198235299-CDS,intron-Distal5.549089.32793HepG2BCLAF1
chr59821767898217694-CDS,intron-Distal,intron-Proximal3.482258.16183HepG2BCLAF1
chr59821775398217799-CDS,intron-Distal4.523408.85766HepG2BCLAF1
chr59821773898217787-CDS,intron-Distal3.668133.14999HepG2GRWD1
chr59821698098217027-CDS,intron-Distal,intron-Proximal4.002103.22063K562TRA2A
chr59823408198234132-CDS,intron-Distal3.703633.45225K562GRWD1
chr59821706598217079-CDS,intron-Distal3.800626.39464HepG2BCLAF1
chr59821768598217755-CDS,intron-Distal4.341833.71264HepG2FXR2
chr59823663298236702-CDS,intron-Distal3.6333611.63522K562UCHL5
chr59823860498238645-CDS,intron-Distal3.6007711.31544K562ZNF622
chr59823651398236555-CDS,intron-Distal,intron-Proximal3.541764.80471K562GRWD1
chr59820545798205528-CDS,intron-Distal,intron-Proximal4.473353.78281HepG2FXR2
chr59823651498236553-CDS,intron-Distal,intron-Proximal3.310877.85158K562UCHL5
chr59823670598236770-CDS,intron-Distal3.255286.73886K562ZNF622
chr59824076398240802-CDS,intron-Distal3.8578711.39909K562ZNF622
chr59823656898236632-CDS,intron-Distal5.3905120.28602K562UCHL5
chr59821677698216812-CDS,intron-Distal,intron-Proximal3.584683.86355HepG2PPIG
chr59821698498217015-CDS,intron-Distal3.027996.06438HepG2BCLAF1
chr59823671498236763-CDS,intron-Distal3.244235.77418K562UCHL5
chr59821216898212250-CDS,intron-Distal3.445387.43909HepG2BCLAF1
chr59824067098240763-CDS,intron-Distal3.4961612.26691K562ZNF622
chr59821530498215356-CDS,intron-Distal4.440178.94008K562ZNF622
chr59823289498232919-CDS,intron-Distal,intron-Proximal4.376036.84316HepG2BCLAF1
chr59822818198228235-CDS,intron-Distal,intron-Proximal3.736504.93376K562PRPF8
chr59822926198229319-CDS,intron-Distal,intron-Proximal3.975173.95991K562U2AF2
chr59823210998232146-CDS,intron-Distal3.483105.91405HepG2BCLAF1
chr59823655498236752-CDS,intron-Distal3.414733.92763K562TRA2A
chr59823444998234466-CDS,intron-Distal4.837626.04243HepG2BCLAF1
chr59823437398234433-CDS,intron-Distal5.0337811.09109HepG2BCLAF1
chr59823659398236638-CDS,intron-Distal4.486273.24150HepG2HLTF
chr59820782598207949-CDS,intron-Distal,intron-Proximal3.823895.09028HepG2U2AF2
chr59823650998236555-CDS,intron-Distal,intron-Proximal3.555123.36788K562NIPBL
chr59821888498218930-CDS,intron-Distal3.094917.90382HepG2BCLAF1
chr59821706398217079-CDS,intron-Distal3.465134.17944K562BUD13
chr59823289798232915-CDS,intron-Distal3.335675.35144K562ZNF622
chr59821890998218934-CDS,intron-Distal3.226115.62120K562ZNF622
chr59821525698215288-CDS,intron-Distal4.602548.41475HepG2BCLAF1
chr59820782898207874-CDS,intron-Distal4.138089.37631HepG2BCLAF1
chr59823444198234466-CDS,intron-Distal3.433717.50303K562UCHL5
chr59820428298204337-CDS,intron-Distal,intron-Proximal3.2728111.85307HepG2BCLAF1
chr59823656498236707-CDS,intron-Distal3.787838.76261HepG2GRWD1
chr59823654998236692-CDS,intron-Distal3.752179.36244HepG2PPIG
chr59823538298235410-CDS,intron-Distal,intron-Proximal5.499509.91970K562ZNF622
chr59823438698234461-CDS,intron-Distal3.243749.91765K562DDX24
chr59823411298234135-CDS,intron-Distal5.103358.06523K562UCHL5
chr59820428498204363-CDS,intron-Distal,intron-Proximal3.227575.97243HepG2U2AF2
chr59823405398234112-CDS,intron-Distal3.674839.11524K562UCHL5
chr59823697598237035-CDS,intron-Distal3.344334.48818HepG2GRWD1
chr59820639098206444-CDS,intron-Distal,intron-Proximal5.7910712.88829HepG2BCLAF1
chr59821219598212258-CDS,intron-Distal3.586714.57186K562TRA2A
chr59822836398228415-CDS,intron-Distal4.0075510.35753HepG2BCLAF1
chr59823657098236685-CDS,intron-Distal6.9074027.08705HepG2BCLAF1
chr59823651498236549-CDS,intron-Distal,intron-Proximal5.6337610.61570K562ZNF622
chr59823800598238072-intron-Distal3.751803.45805K562KHSRP
chr59822361898223649-intron-Distal3.669927.21887K562KHSRP
chr59819105098191069-intron-Distal4.182398.68778K562PUM2
chr59822356298223666-intron-Distal5.069825.95026HepG2U2AF2
chr59819093698190975-intron-Distal4.324927.45604K562PUM2
chr59823261298232668-intron-Distal3.289343.07751K562KHSRP
chr59823022098230294-intron-Distal,intron-Proximal3.401583.46531K562KHSRP
chr59821898898219088-intron-Distal,intron-Proximal4.421355.19823K562KHSRP
chr59820529198205350-intron-Distal4.376613.88340K562TARDBP
chr59820407598204197-intron-Distal,intron-Proximal4.119058.75974K562KHSRP
chr59819138298191429-intron-Distal,intron-Proximal4.895253.74454K562ZC3H11A
chr59822469198224756-intron-Distal,intron-Proximal3.832185.35459K562KHSRP
chr59820541498205438-intron-Distal,intron-Proximal4.284596.48405K562AQR
chr59820435398204439-intron-Distal,intron-Proximal4.381265.62025K562KHSRP
chr59823023798230287-intron-Distal,intron-Proximal4.030783.54514K562TIA1
chr59820271198202808-intron-Distal3.335973.29213HepG2KHSRP
chr59819116198191258-intron-Distal4.009053.33617HepG2PABPN1
chr59824830198248381-intron-Distal3.858803.99545K562HNRNPC
chr59821510698215159-intron-Distal,intron-Proximal3.185103.73266K562KHSRP
chr59825741798257513-intron-Distal3.347164.41411K562TARDBP
chr59819888298198955-intron-Distal4.086204.07352K562KHSRP
chr59825078398250888-intron-Distal4.019557.26586K562KHSRP
chr59822253198222581-intron-Distal4.176886.44495HepG2U2AF2
chr59821515998215215-intron-Distal,intron-Proximal3.723513.25538K562KHSRP
chr59822359798223618-intron-Distal3.964705.78005K562KHSRP
chr59820070898200753-intron-Distal3.101503.10883HepG2SUGP2
chr59822266298222710-intron-Distal3.142614.18806HepG2U2AF2
chr59821711798217209-intron-Distal,intron-Proximal4.130238.75493K562KHSRP
chr59823417598234248-intron-Distal,intron-Proximal3.609103.02234K562KHSRP
chr59821193998212082-intron-Distal,intron-Proximal3.279585.34873K562KHSRP
chr59824103998241137-intron-Distal3.021003.55116K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHD1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of CHD1.  








The Knockdown/knockout RNA-Seq assay for CHD1 is not available on ENCORE database.





95 RBPs can affect the gene expression of CHD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHD1ENSG00000153922.6846.140701146.31920-0.438002.224401.38800HepG2BCCIP
CHD1ENSG00000153922.61452.025402065.38190-0.508305.356804.42980HepG2CPSF6
CHD1ENSG00000153922.61379.214001048.001600.396103.851402.76200HepG2DDX24
CHD1ENSG00000153922.6848.742201127.00680-0.409101.989101.32220HepG2DDX55
CHD1ENSG00000153922.6799.315801101.75410-0.463007.537806.53300HepG2DNAJC2
CHD1ENSG00000153922.6924.661901309.16130-0.501604.095703.38350HepG2EIF2S1
CHD1ENSG00000153922.61451.879501059.233000.454803.773002.72750HepG2EIF3D
CHD1ENSG00000153922.61249.586201011.331400.305102.493601.46700HepG2EIF3G
CHD1ENSG00000153922.6911.032601446.87820-0.667406.060305.11780HepG2EIF4A3
CHD1ENSG00000153922.61814.551901462.556100.311003.440902.52380HepG2EIF4G1
CHD1ENSG00000153922.62413.667901930.215400.322402.178301.49130HepG2FIP1L1
CHD1ENSG00000153922.61338.79050873.904600.615307.810006.52430HepG2FUBP3
CHD1ENSG00000153922.61634.200602341.28890-0.518704.716903.89530HepG2GPKOW
CHD1ENSG00000153922.6855.799801122.20640-0.391003.346602.64400HepG2HNRNPA1
CHD1ENSG00000153922.6991.896601248.25120-0.331602.463701.80650HepG2HNRNPC
CHD1ENSG00000153922.61333.283101642.83280-0.301202.975002.23320HepG2HNRNPF
CHD1ENSG00000153922.61121.387901350.78080-0.268502.283201.66270HepG2HNRNPL
CHD1ENSG00000153922.61831.962302234.33360-0.286501.976601.43630HepG2HNRNPLL
CHD1ENSG00000153922.6883.006501239.99820-0.489807.835506.85440HepG2HNRNPU
CHD1ENSG00000153922.61124.441101617.74010-0.524806.063605.03280HepG2IGF2BP1
CHD1ENSG00000153922.61051.080801266.61650-0.269103.262702.47270HepG2ILF2
CHD1ENSG00000153922.61536.477002475.28950-0.688005.803204.59100HepG2LARP4
CHD1ENSG00000153922.61798.999701449.226600.311803.934003.02650HepG2PRPF4
CHD1ENSG00000153922.61160.421401403.42680-0.274301.984201.46820HepG2PUF60
CHD1ENSG00000153922.61966.247301489.694100.400304.951004.20470HepG2PUM1
CHD1ENSG00000153922.61777.938701488.671500.256101.908201.34530HepG2PUM2
CHD1ENSG00000153922.61074.680501441.96200-0.424103.622002.93690HepG2PUS1
CHD1ENSG00000153922.61876.045501391.982400.430505.578104.73750HepG2QKI
CHD1ENSG00000153922.62987.882501307.155801.1926011.6316010.26220HepG2RAVER1
CHD1ENSG00000153922.61894.662201263.291300.584708.215207.10300HepG2RBM25
CHD1ENSG00000153922.61651.362201332.133000.309803.450502.77150HepG2RECQL
CHD1ENSG00000153922.61157.970101499.12960-0.372502.018601.33560HepG2RPS3A
CHD1ENSG00000153922.61284.903001104.270900.218502.167601.58520HepG2SAFB2
CHD1ENSG00000153922.63651.135002017.264600.855805.077004.14450HepG2SF3A3
CHD1ENSG00000153922.62740.983902211.559000.309502.530301.85370HepG2SF3B1
CHD1ENSG00000153922.61818.312501338.128100.442307.168006.28780HepG2SF3B4
CHD1ENSG00000153922.63045.946102210.681700.4623011.6731010.83400HepG2SRFBP1
CHD1ENSG00000153922.61809.264401396.695700.373305.570904.95840HepG2SRSF1
CHD1ENSG00000153922.61695.386001385.553200.291101.893001.36190HepG2SRSF5
CHD1ENSG00000153922.61169.989901613.96370-0.464104.951304.06160HepG2SRSF7
CHD1ENSG00000153922.61506.427101136.268900.406706.305205.53190HepG2SRSF9
CHD1ENSG00000153922.61914.192501221.483800.648004.688803.11220HepG2SUB1
CHD1ENSG00000153922.62121.935101575.863800.429105.828404.98590HepG2SUCLG1
CHD1ENSG00000153922.62118.105001255.348400.7546017.5327016.29470HepG2TAF15
CHD1ENSG00000153922.61483.772501153.553800.363103.573102.62780HepG2TIA1
CHD1ENSG00000153922.6900.116001204.87470-0.420704.534203.92720HepG2TIAL1
CHD1ENSG00000153922.62763.179201651.454200.7425011.7332010.41130HepG2U2AF1
CHD1ENSG00000153922.61911.422701450.980200.397502.458801.67360HepG2UBE2L3
CHD1ENSG00000153922.62052.686801727.215400.249002.924002.31170HepG2UTP3
CHD1ENSG00000153922.61758.544501284.854000.452702.582101.36820HepG2XRCC5
CHD1ENSG00000153922.6789.935601104.49980-0.483602.705201.98880HepG2XRN2
CHD1ENSG00000153922.61171.547201430.21200-0.287803.706702.94870HepG2ZC3H8
CHD1ENSG00000153922.62868.552802166.983100.404504.662203.08430K562AARS
CHD1ENSG00000153922.64370.473003441.790900.344507.023006.17870K562AGGF1
CHD1ENSG00000153922.64530.350603581.349200.339003.568602.82260K562AKAP8L
CHD1ENSG00000153922.62047.866602459.57640-0.264303.076502.06850K562BCLAF1
CHD1ENSG00000153922.62483.509903477.01850-0.485505.399104.16940K562BOP1
CHD1ENSG00000153922.64078.957405100.37910-0.322405.130603.58860K562CPEB4
CHD1ENSG00000153922.62350.697803696.98390-0.6533012.7178011.02530K562CPSF6
CHD1ENSG00000153922.61514.631301865.95520-0.300902.817501.75050K562CSTF2
CHD1ENSG00000153922.67906.311306868.258300.203002.383201.48000K562CELF1
CHD1ENSG00000153922.61753.079302336.25830-0.414304.761303.34230K562DDX3X
CHD1ENSG00000153922.63063.479902218.455000.465503.621302.13110K562EEF2
CHD1ENSG00000153922.62057.069502566.39290-0.319203.107101.81280K562EIF2S1
CHD1ENSG00000153922.62537.326803511.26850-0.468704.398703.51940K562EIF2S2
CHD1ENSG00000153922.66293.625305586.515000.171802.224501.37820K562EIF4G2
CHD1ENSG00000153922.62638.665604210.10780-0.674009.336707.67770K562FIP1L1
CHD1ENSG00000153922.62597.247502057.879700.335702.546401.47230K562FKBP4
CHD1ENSG00000153922.62717.440203761.75670-0.469205.480404.26860K562FMR1
CHD1ENSG00000153922.62486.467403188.49910-0.358802.980102.03040K562FTO
CHD1ENSG00000153922.63075.465902538.440200.276803.104002.46850K562FXR1
CHD1ENSG00000153922.64448.486802857.586200.638403.883803.01260K562G3BP2
CHD1ENSG00000153922.62437.208103529.64230-0.534307.662806.33770K562GPKOW
CHD1ENSG00000153922.62819.100204679.59110-0.731105.782504.68480K562GRSF1
CHD1ENSG00000153922.63546.487302594.385100.450906.261904.68360K562HNRNPA1
CHD1ENSG00000153922.61668.913502372.11510-0.507303.266902.62640K562HNRNPC
CHD1ENSG00000153922.63468.779004769.71110-0.459506.524404.83700K562HNRNPL
CHD1ENSG00000153922.62420.387003462.68880-0.516704.021002.88430K562HNRNPM
CHD1ENSG00000153922.63639.679505708.27180-0.649208.944507.52750K562HSPD1
CHD1ENSG00000153922.61558.295201197.951200.379302.867501.35690K562KHDRBS1
CHD1ENSG00000153922.65308.465803800.672200.481902.210101.48260K562KIF1C
CHD1ENSG00000153922.62182.285803133.22390-0.521803.513102.45840K562MATR3
CHD1ENSG00000153922.62314.255903445.35320-0.574108.982607.33450K562METAP2
CHD1ENSG00000153922.62894.938903463.06970-0.258504.038403.07620K562MTPAP
CHD1ENSG00000153922.61580.601202111.48290-0.417803.332601.88610K562NONO
CHD1ENSG00000153922.63248.819003847.83400-0.244105.517604.51780K562NSUN2
CHD1ENSG00000153922.62760.474804779.03840-0.7918012.1345010.04850K562PPIG
CHD1ENSG00000153922.62616.783402085.992300.327002.794502.04120K562PRPF8
CHD1ENSG00000153922.61545.452102126.72710-0.460602.774501.86940K562PSIP1
CHD1ENSG00000153922.65210.695906352.50420-0.285803.959802.80660K562PUM2
CHD1ENSG00000153922.64890.818403551.645800.461505.217104.50180K562PUS1
CHD1ENSG00000153922.65138.466303460.601700.5702013.4104012.09880K562RBM15
CHD1ENSG00000153922.62168.947102925.47440-0.431702.024501.31000K562RBM22
CHD1ENSG00000153922.66070.604203709.548500.710503.049201.41320K562RBM39
CHD1ENSG00000153922.61374.046301939.77220-0.497504.021002.82490K562RCC2
CHD1ENSG00000153922.62190.584402976.60190-0.442402.781001.77590K562RPS3
CHD1ENSG00000153922.63718.349402971.543700.323303.952602.92510K562SF3B4
CHD1ENSG00000153922.65150.489703166.930200.701503.178001.82510K562SNRNP200
CHD1ENSG00000153922.61406.467601838.91340-0.386802.637301.64320K562SRFBP1
CHD1ENSG00000153922.64510.624703889.847300.213502.299501.43800K562SRPK2
CHD1ENSG00000153922.62153.943702874.06960-0.416102.652201.62750K562SRSF4
CHD1ENSG00000153922.63538.954902446.293900.532609.311007.79960K562SYNCRIP
CHD1ENSG00000153922.62038.726903026.23660-0.569903.830402.99170K562TARDBP
CHD1ENSG00000153922.62087.059702919.03430-0.484003.231102.33700K562TIA1
CHD1ENSG00000153922.64216.464302770.105800.606006.311404.51620K562U2AF1
CHD1ENSG00000153922.64223.726602860.858800.5620010.722709.13440K562U2AF2
CHD1ENSG00000153922.63039.859504079.93580-0.4245010.527909.24050K562UPF1
CHD1ENSG00000153922.64508.968703630.270400.312606.715305.45160K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHD1 is not available on ENCORE database.





14 RBPs can affect the splicing of CHD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECHD1ENSG00000153922.6chr5-9822230098222330982212819822135398223791982238900.070000.000520.01218includedK562SRSF1
SECHD1ENSG00000153922.6chr5-9820471798204981982041989820433998205457982055860.171000.000110.00334includedK562SRSF1
SECHD1ENSG00000153922.6chr5-982368899823703998236514982367869823860398238668-0.148000.000110.00344excludedK562SF3B4
SECHD1ENSG00000153922.6chr5-982187919821894198217678982178279822128198221353-0.083000.003080.05167excludedHepG2U2AF1
SECHD1ENSG00000153922.6chr5-982077549820792498206390982065079820812098208259-0.065000.003090.03137excludedK562AQR
SECHD1ENSG00000153922.6chr5-982368899823703998236514982367869823860398238668-0.052000.008040.06824excludedK562AQR
SECHD1ENSG00000153922.6chr5-981991119819929098195675981957729820419898204313-0.064000.001110.01339excludedK562AQR
SECHD1ENSG00000153922.6chr5-9820471798204981982041989820433998205457982055860.347000.000000.00000includedK562HNRNPA1
SECHD1ENSG00000153922.6chr5-982047179820498198204198982043399820545798205586-0.186000.000710.08419excludedK562DROSHA
SECHD1ENSG00000153922.6chr5-9820471798204981982041989820433998205457982055860.134000.001490.02367includedK562PUS1
SECHD1ENSG00000153922.6chr5-982081209820825998207754982079059820929698209427-0.075000.000010.00039excludedK562PUS1
SECHD1ENSG00000153922.6chr5-981946679819471998193883981940949819911198199290-0.054000.002170.03211excludedK562PUS1
SECHD1ENSG00000153922.6chr5-981991119819929098195675981957729820419898204339-0.100000.000980.05860excludedHepG2FTO
SECHD1ENSG00000153922.6chr5-982303009823039098229119982293109823192998232146-0.148000.000010.00063excludedK562U2AF1
SECHD1ENSG00000153922.6chr5-9820471798204981982041989820433998205457982055860.159000.004150.07682includedHepG2SRSF1
SECHD1ENSG00000153922.6chr5-982081209820825998207754982079059821077598210817-0.067000.000720.02684excludedK562UTP18
SECHD1ENSG00000153922.6chr5-982368899823703998236514982367869823860398238668-0.085000.001660.03020excludedK562U2AF2
SECHD1ENSG00000153922.6chr5-982303009823039098229119982293109823192998232146-0.188000.000000.00005excludedK562U2AF2
SECHD1ENSG00000153922.6chr5-981991119819929098195675981957729820419898204339-0.061000.002680.04423excludedK562U2AF2
SECHD1ENSG00000153922.6chr5-982047179820498198204198982043399820545798205586-0.120000.000240.01230excludedK562TARDBP
SECHD1ENSG00000153922.6chr5-9820471798204981982041989820433998205457982055860.173000.000270.00993includedK562AGGF1
A3SSCHD1ENSG00000153922.6chr5-9823395998234160982339599823413898234367982344680.161000.000000.00000longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9819567598195897981956759819577298199111981993570.064000.001250.00849longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9820419898204437982041989820433998205457982056390.123000.000000.00000longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9821210198212288982121019821226298215255982154810.055000.000020.00024longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9822128198221376982212819822135398223791982239440.116000.000000.00000longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9822822898228446982282289822841798229119982293100.158000.000000.00000longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9820545798205639982054579820558698206390982065370.053000.000020.00019longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9819388398194125981938839819409498194667981947190.065000.000080.00072longerK562AQR
A3SSCHD1ENSG00000153922.6chr5-9820775498207951982077549820790598208120982082590.072000.000000.00116longerK562UTP18
MXECHD1ENSG00000153922.6chr5-98199111981993349820419898204399981956759819577298205457982055860.105000.000160.001801includedK562AQR
MXECHD1ENSG00000153922.6chr5-98199111981993349820419898204437981956759819577298205457982055860.108000.000160.001781includedK562AQR
MXECHD1ENSG00000153922.6chr5-98199111981992909820419898204399981956759819577298205457982055860.102000.000210.002291includedK562AQR
MXECHD1ENSG00000153922.6chr5-98199111981992909820419898204437981956759819577298205457982055860.105000.000210.002281includedK562AQR
MXECHD1ENSG00000153922.6chr5-9820812098208259982093549820942798207754982079249821077598210817-0.060000.004470.032652includedK562AQR
MXECHD1ENSG00000153922.6chr5-9820812098208259982092969820942798207754982079059821077598210817-0.161000.000620.041662includedK562LARP7
MXECHD1ENSG00000153922.6chr5-98194667981947199819567598195772981938839819409498204198982042430.064000.002930.043601includedK562SF3B4
MXECHD1ENSG00000153922.6chr5-9819466798194719981956759819577298193883981940949819911198199290-0.246000.000290.039152includedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CHD1 is not avaliable on ENCORE database.