CAMK2D

General Information

Gene Name : CAMK2D
Gene ID : ENSG00000145349.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CAMK2D)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CAMK2D	ENSG00000145349.16	11.06	10.32	10.69	ENCSR000AEF
HepG2	CAMK2D	ENSG00000145349.16	17.68	29.67	23.68	ENCSR985KAT
K562	CAMK2D	ENSG00000145349.16	0.09	0.03	0.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CAMK2D is not avaliable on ENCORE database.

Proteins bound to RNA

CAMK2D RNA is bound by 12 proteins.

CanvasJS.com

eCLIP assay for CAMK2D is not avaliable on ENCORE database.

12 proteins are bound to CAMK2D RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	114374822	114374930	-	3'-UTR,intron-Distal	4.71910	14.97374	HepG2	PTBP1
chr4	114468798	114468902	-	CDS,intron-Distal,intron-Proximal	4.78583	13.19288	HepG2	RBFOX2
chr4	114547266	114547372	-	intron-Distal	4.56648	11.19329	HepG2	HNRNPL
chr4	114680469	114680570	-	CDS,intron-Distal,intron-Proximal	3.20341	7.99106	HepG2	GRWD1
chr4	114506715	114506798	-	intron-Distal	5.39464	7.75161	HepG2	QKI
chr4	114506798	114506831	-	intron-Distal	6.36355	7.62903	HepG2	QKI
chr4	114458770	114458893	-	intron-Distal	5.40886	7.27507	HepG2	U2AF2
chr4	114506831	114506871	-	intron-Distal	6.12534	6.93116	HepG2	QKI
chr4	114431991	114432148	-	intron-Distal	4.43627	6.74598	HepG2	QKI
chr4	114678949	114679053	-	intron-Distal	3.36965	6.64539	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 33 entries

eCLIP assay for CAMK2D is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CAMK2D is not available on ENCORE database.
55 RBPs can affect the levels of CAMK2D.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.

55 RBPs can affect the gene expression of CAMK2D :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CAMK2D	ENSG00000145349.12	311.25970	1443.74800	-2.21360	54.84910	52.53870	HepG2	EIF2S1
CAMK2D	ENSG00000145349.12	542.04440	1595.58240	-1.55760	28.49710	26.48190	HepG2	EIF4A3
CAMK2D	ENSG00000145349.12	1692.45450	1027.95070	0.71920	19.09480	17.73750	HepG2	PUS1
CAMK2D	ENSG00000145349.12	2387.06630	1537.56000	0.63450	16.58610	15.63450	HepG2	SRSF1
CAMK2D	ENSG00000145349.12	764.66300	1299.21830	-0.76470	16.84660	15.48660	HepG2	SRSF5
CAMK2D	ENSG00000145349.12	893.23240	1381.99150	-0.62960	10.84930	9.85480	HepG2	TAF15
CAMK2D	ENSG00000145349.12	2322.91340	1691.93940	0.45720	9.65210	8.87150	HepG2	SRFBP1
CAMK2D	ENSG00000145349.12	1256.01290	706.91830	0.82910	10.01300	8.59720	HepG2	PRPF8
CAMK2D	ENSG00000145349.12	2252.38710	1532.35450	0.55560	9.48620	8.42980	HepG2	QKI
CAMK2D	ENSG00000145349.12	500.07130	931.93970	-0.89810	8.43600	6.76000	HepG2	BCCIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 55 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.

5 RBPs can affect the splicing of CAMK2D :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CAMK2D	ENSG00000145349.12	chr4	-	114376881	114376977			114372187	114375671	114378490	114378719	0.62800	0.00000	0.00001	included	HepG2	HNRNPC
MXE	CAMK2D	ENSG00000145349.12	chr4	-	114468799	114468872	114469812	114469885	114458496	114458599	114473186	114473252	-0.16200	0.00002	0.00096	2included	HepG2	FTO
A5SS	CAMK2D	ENSG00000145349.12	chr4	-	114378446	114378719			114378490	114378719	114372187	114375671	0.29100	0.00005	0.01770	longer	HepG2	IGF2BP3
SE	CAMK2D	ENSG00000145349.12	chr4	-	114600558	114600652			114582868	114582928	114680475	114680570	0.27800	0.00145	0.05917	included	HepG2	SFPQ
SE	CAMK2D	ENSG00000145349.12	chr4	-	114376881	114376977			114372187	114375671	114378490	114378719	0.26700	0.00228	0.07946	included	HepG2	HNRNPU

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CAMK2D

General Information

Functions

Localization

Domains (AlphaFold: CAMK2D)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CAMK2D is not avaliable on ENCORE database.

12 proteins are bound to CAMK2D RNA:

eCLIP assay for CAMK2D is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.

55 RBPs can affect the gene expression of CAMK2D :

The Knockdown/knockout RNA-Seq assay for CAMK2D is not available on ENCORE database.

5 RBPs can affect the splicing of CAMK2D :

The Knockdown/knockout RNA-Seq assay for CAMK2D is not avaliable on ENCORE database.