C5orf45

General Information

Gene Name : C5orf45
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C5orf45)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C5orf45 is not avaliable on ENCORE database.

Proteins bound to RNA

C5orf45 RNA is bound by 18 proteins.

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eCLIP assay for C5orf45 is not avaliable on ENCORE database.

18 proteins are bound to C5orf45 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	179268906	179268991	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.58263	19.97843	HepG2	PPIG
chr5	179267839	179267963	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36216	17.98460	HepG2	PPIG
chr5	179279858	179279985	-	intron-Distal	5.23990	17.55292	HepG2	SUGP2
chr5	179264927	179264987	-	3'-UTR,intron-Distal,intron-Proximal	6.25490	15.54047	HepG2	RBM5
chr5	179275730	179275872	-	intron-Distal	4.30737	15.02086	HepG2	SUGP2
chr5	179277791	179277879	-	intron-Distal	5.53681	12.60653	HepG2	SUGP2
chr5	179277597	179277671	-	intron-Distal	5.46405	12.10180	HepG2	SUGP2
chr5	179277465	179277539	-	intron-Distal	4.20006	11.97556	HepG2	SUGP2
chr5	179268905	179269056	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.14680	11.63125	K562	UCHL5
chr5	179268902	179268970	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.39577	11.49169	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 43 entries

eCLIP assay for C5orf45 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C5orf45 is not available on ENCORE database.
90 RBPs can affect the levels of C5orf45.

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The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.

90 RBPs can affect the gene expression of C5orf45 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C5orf45	ENSG00000161010.10	1059.05630	484.37130	1.12850	17.29420	15.70400	HepG2	HNRNPK
C5orf45	ENSG00000161010.10	1014.15490	525.83980	0.94750	15.84220	14.56680	HepG2	RECQL
C5orf45	ENSG00000161010.10	1013.09010	564.54460	0.84350	15.50310	14.41780	HepG2	NELFE
C5orf45	ENSG00000161010.10	689.26980	363.49020	0.92310	10.92740	9.41450	HepG2	FUBP3
C5orf45	ENSG00000161010.10	1110.20370	740.26870	0.58460	9.26340	8.27350	HepG2	UTP3
C5orf45	ENSG00000161010.10	851.07870	462.47030	0.87980	9.32170	8.27310	HepG2	EIF2S1
C5orf45	ENSG00000161010.10	952.52530	530.94730	0.84310	8.71240	7.62140	HepG2	NCBP2
C5orf45	ENSG00000161010.10	768.85070	445.57410	0.78690	8.95300	7.15850	K562	PCBP2
C5orf45	ENSG00000161010.10	900.19690	515.84040	0.80320	8.02990	6.92460	HepG2	MAGOH
C5orf45	ENSG00000161010.10	728.65920	495.60160	0.55600	7.83440	6.80820	HepG2	DNAJC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.

17 RBPs can affect the splicing of C5orf45 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	C5orf45	ENSG00000161010.10	chr5	-	179280196	179280437			179280377	179280437	179274977	179275066	-0.10200	0.00000	0.00018	shorter	HepG2	U2AF2
MXE	C5orf45	ENSG00000161010.10	chr5	-	179271151	179271227	179274977	179275113	179268906	179269064	179280377	179280437	0.14600	0.00001	0.00021	1included	K562	AQR
MXE	C5orf45	ENSG00000161010.10	chr5	-	179271151	179271227	179274977	179275066	179268906	179269064	179280377	179280437	0.27200	0.00003	0.00221	1included	K562	DDX55
SE	C5orf45	ENSG00000161010.10	chr5	-	179280196	179280276			179274977	179275066	179280377	179280437	-0.10400	0.00004	0.00085	excluded	HepG2	U2AF2
MXE	C5orf45	ENSG00000161010.10	chr5	-	179274977	179275066	179280377	179280437	179268906	179269064	179285730	179285808	-0.23600	0.00005	0.00060	2included	K562	AQR
SE	C5orf45	ENSG00000161010.10	chr5	-	179271151	179271227			179268906	179269064	179274977	179275066	-0.11800	0.00012	0.00201	excluded	K562	AQR
SE	C5orf45	ENSG00000161010.10	chr5	-	179280196	179280276			179274977	179275066	179280377	179280437	0.38200	0.00015	0.03195	included	HepG2	TIA1
RI	C5orf45	ENSG00000161010.10	chr5	-	179264275	179267959			179264275	179264885	179267871	179267959	-0.33700	0.00016	0.00276	excluded	HepG2	RBM22
RI	C5orf45	ENSG00000161010.10	chr5	-	179264275	179267959			179264275	179264885	179267871	179267959	0.37300	0.00020	0.00243	included	HepG2	SF3B4
MXE	C5orf45	ENSG00000161010.10	chr5	-	179271151	179271227	179274977	179275066	179268906	179269064	179280377	179280437	-0.17300	0.00020	0.05321	2included	K562	UTP3

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C5orf45

General Information

Functions

Localization

Domains (AlphaFold: C5orf45)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C5orf45 is not avaliable on ENCORE database.

18 proteins are bound to C5orf45 RNA:

eCLIP assay for C5orf45 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.

90 RBPs can affect the gene expression of C5orf45 :

The Knockdown/knockout RNA-Seq assay for C5orf45 is not available on ENCORE database.

17 RBPs can affect the splicing of C5orf45 :

The Knockdown/knockout RNA-Seq assay for C5orf45 is not avaliable on ENCORE database.