C2orf68

General Information

Gene Name : C2orf68
Gene ID : ENSG00000168887.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C2orf68)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	C2orf68	ENSG00000168887.10	15.97	18.06	17.02	ENCSR000AEF
HepG2	C2orf68	ENSG00000168887.10	31.52	33.18	32.35	ENCSR985KAT
K562	C2orf68	ENSG00000168887.10	22.89	21.42	22.16	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C2orf68 is not avaliable on ENCORE database.

Proteins bound to RNA

C2orf68 RNA is bound by 8 proteins.

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eCLIP assay for C2orf68 is not avaliable on ENCORE database.

8 proteins are bound to C2orf68 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	85839059	85839165	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.80872	34.08100	HepG2	DDX3X
chr2	85835473	85835532	-	3'-UTR,intron-Distal	4.28090	25.72686	HepG2	XPO5
chr2	85835530	85835623	-	3'-UTR,intron-Distal,intron-Proximal	3.18233	17.74374	HepG2	DDX55
chr2	85838996	85839158	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.52541	15.16545	K562	DDX3X
chr2	85838807	85838908	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.43829	10.84333	HepG2	PPIG
chr2	85839102	85839162	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.56370	9.46330	HepG2	NCBP2
chr2	85835923	85835977	-	3'-UTR,intron-Distal	3.89642	7.09919	K562	RBM15
chr2	85838561	85838694	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.23524	6.12368	HepG2	GRWD1
chr2	85835532	85835622	-	3'-UTR,intron-Distal,intron-Proximal	4.96340	6.10242	HepG2	TIA1
chr2	85835924	85835981	-	3'-UTR,intron-Distal	4.04630	5.78731	HepG2	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 12 entries

eCLIP assay for C2orf68 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C2orf68 is not available on ENCORE database.
71 RBPs can affect the levels of C2orf68.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.

71 RBPs can affect the gene expression of C2orf68 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C2orf68	ENSG00000168887.6	730.28730	1273.33170	-0.80210	18.96690	17.96280	HepG2	SRFBP1
C2orf68	ENSG00000168887.6	436.53000	1173.17430	-1.42630	19.32600	17.92160	K562	PUS1
C2orf68	ENSG00000168887.6	606.86180	1127.38380	-0.89350	17.67950	16.60150	HepG2	RBM22
C2orf68	ENSG00000168887.6	567.67080	991.31320	-0.80430	15.67590	14.42260	HepG2	PCBP1
C2orf68	ENSG00000168887.6	1378.37540	863.34000	0.67490	15.67540	14.29020	HepG2	ZC3H8
C2orf68	ENSG00000168887.6	1073.22990	571.82750	0.90820	13.87480	12.61970	K562	HNRNPC
C2orf68	ENSG00000168887.6	584.83870	1142.87770	-0.96660	13.53480	12.21860	K562	RBM15
C2orf68	ENSG00000168887.6	615.37890	1182.71450	-0.94260	12.69080	11.14760	K562	AKAP8L
C2orf68	ENSG00000168887.6	474.62570	973.21880	-1.03600	11.99080	10.65360	HepG2	U2AF1
C2orf68	ENSG00000168887.6	579.95350	1136.66250	-0.97080	11.17210	10.12670	K562	AGGF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.

12 RBPs can affect the splicing of C2orf68 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.20700	0.00000	0.00081	included	HepG2	TIA1
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.14700	0.00002	0.00341	included	HepG2	QKI
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.14900	0.00002	0.00059	included	K562	PUS1
SE	C2orf68	ENSG00000168887.6	chr2	-	85838514	85838696	85836557	85836709	85838790	85838864	0.12400	0.00004	0.01370	included	K562	LARP4
SE	C2orf68	ENSG00000168887.6	chr2	-	85838519	85838696	85836557	85836709	85838790	85838864	0.15400	0.00009	0.00346	included	HepG2	SRSF1
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.13900	0.00020	0.01013	included	K562	UTP18
A3SS	C2orf68	ENSG00000168887.6	chr2	-	85836557	85836776	85836557	85836709	85838596	85838696	-0.61200	0.00027	0.02978	shorter	K562	AGGF1
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.18400	0.00028	0.02958	included	HepG2	DDX6
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	0.11900	0.00029	0.01060	included	K562	AGGF1
SE	C2orf68	ENSG00000168887.6	chr2	-	85838596	85838696	85836557	85836709	85838790	85838864	-0.27800	0.00064	0.04849	excluded	HepG2	TIAL1

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C2orf68

General Information

Functions

Localization

Domains (AlphaFold: C2orf68)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C2orf68 is not avaliable on ENCORE database.

8 proteins are bound to C2orf68 RNA:

eCLIP assay for C2orf68 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.

71 RBPs can affect the gene expression of C2orf68 :

The Knockdown/knockout RNA-Seq assay for C2orf68 is not available on ENCORE database.

12 RBPs can affect the splicing of C2orf68 :

The Knockdown/knockout RNA-Seq assay for C2orf68 is not avaliable on ENCORE database.