C11orf57

General Information

Gene Name : C11orf57
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C11orf57)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C11orf57 is not avaliable on ENCORE database.

Proteins bound to RNA

C11orf57 RNA is bound by 8 proteins.

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eCLIP assay for C11orf57 is not avaliable on ENCORE database.

8 proteins are bound to C11orf57 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	111945076	111945284	+	5'-UTR,intron-Distal,intron-Proximal	3.48419	6.73521	K562	DDX3X
chr11	111951125	111951279	+	3'-UTR,CDS,intron-Proximal	3.42259	6.20035	HepG2	BCLAF1
chr11	111951124	111951258	+	3'-UTR,CDS,intron-Proximal	4.80211	4.90367	K562	ZNF622
chr11	111945197	111945251	+	5'-UTR,intron-Distal	4.94127	4.75034	HepG2	XPO5
chr11	111954792	111954854	+	3'-UTR	4.21028	4.51688	K562	YBX3
chr11	111951176	111951297	+	3'-UTR,CDS,intron-Proximal	3.62426	4.22563	K562	UCHL5
chr11	111953185	111953223	+	3'-UTR,CDS,intron-Proximal	4.24130	3.89826	HepG2	BCLAF1
chr11	111952557	111952667	+	3'-UTR,intron-Distal,intron-Proximal	4.09583	3.89294	K562	KHSRP
chr11	111954767	111954843	+	3'-UTR	4.18695	3.47885	K562	LIN28B
chr11	111948995	111949043	+	CDS,intron-Distal,intron-Proximal	4.02688	3.02457	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for C11orf57 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C11orf57 is not available on ENCORE database.
68 RBPs can affect the levels of C11orf57.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.

68 RBPs can affect the gene expression of C11orf57 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C11orf57	ENSG00000150776.13	274.74900	699.52410	-1.34830	28.97750	26.99570	HepG2	PRPF4
C11orf57	ENSG00000150776.13	1143.84070	658.81420	0.79580	14.63240	13.35340	K562	FXR1
C11orf57	ENSG00000150776.13	638.51140	1130.42820	-0.82410	14.51160	13.14240	K562	RBM15
C11orf57	ENSG00000150776.13	612.16780	1169.84940	-0.93430	14.63390	12.93560	K562	AKAP8L
C11orf57	ENSG00000150776.13	262.82190	899.16800	-1.77450	13.87130	12.49100	HepG2	IGF2BP2
C11orf57	ENSG00000150776.13	1729.39630	1021.46640	0.75950	14.32880	12.46100	K562	SYNCRIP
C11orf57	ENSG00000150776.13	401.59620	907.34510	-1.17590	14.37920	11.58920	K562	IGF2BP2
C11orf57	ENSG00000150776.13	562.32870	923.40570	-0.71560	10.62680	9.75640	HepG2	RBM22
C11orf57	ENSG00000150776.13	725.39350	1124.28200	-0.63220	10.49320	9.48080	K562	AGGF1
C11orf57	ENSG00000150776.13	712.45260	1160.29080	-0.70360	8.50890	7.60480	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 76 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.

4 RBPs can affect the splicing of C11orf57 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	C11orf57	ENSG00000150776.13	chr11	+	111947449	111947609	111946290	111946367	111948938	111949039	0.21400	0.00000	0.00890	included	HepG2	RBM5
A3SS	C11orf57	ENSG00000150776.13	chr11	+	111951111	111951282	111951132	111951282	111948938	111949039	0.06700	0.00000	0.00003	longer	K562	AQR
A5SS	C11orf57	ENSG00000150776.13	chr11	+	111946253	111946408	111946253	111946367	111948938	111949140	0.18500	0.00000	0.00004	longer	K562	AQR
A5SS	C11orf57	ENSG00000150776.13	chr11	+	111948938	111949140	111948938	111949039	111951132	111953151	0.09300	0.00000	0.00000	longer	K562	AQR
A5SS	C11orf57	ENSG00000150776.13	chr11	+	111946290	111946408	111946290	111946367	111948938	111949039	-0.13300	0.00007	0.02713	shorter	HepG2	TBRG4
SE	C11orf57	ENSG00000150776.13	chr11	+	111945470	111945640	111945033	111945082	111946290	111946367	-0.31600	0.00027	0.00862	excluded	HepG2	SRSF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C11orf57

General Information

Functions

Localization

Domains (AlphaFold: C11orf57)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C11orf57 is not avaliable on ENCORE database.

8 proteins are bound to C11orf57 RNA:

eCLIP assay for C11orf57 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.

68 RBPs can affect the gene expression of C11orf57 :

The Knockdown/knockout RNA-Seq assay for C11orf57 is not available on ENCORE database.

4 RBPs can affect the splicing of C11orf57 :

The Knockdown/knockout RNA-Seq assay for C11orf57 is not avaliable on ENCORE database.