B4GALT2

General Information

Gene Name       : B4GALT2
Gene ID             : ENSG00000117411.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: B4GALT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878B4GALT2ENSG00000117411.1611.7420.3916.07ENCSR000AEF
HepG2B4GALT2ENSG00000117411.1651.6028.2039.90ENCSR985KAT
K562B4GALT2ENSG00000117411.1650.3342.8246.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for B4GALT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • B4GALT2 RNA is bound by 20 proteins.  







eCLIP assay for B4GALT2 is not avaliable on ENCORE database.





20 proteins are bound to B4GALT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14445658844456633+3'-UTR4.111003.15159HepG2LARP4
chr14445632644456494+3'-UTR5.779828.73200HepG2UPF1
chr14445675644456826+3'-UTR6.632457.00172K562PUM2
chr14445608744456135+3'-UTR,CDS4.215473.67707K562METAP2
chr14445671944456801+3'-UTR3.226666.37005K562UPF1
chr14445607244456206+3'-UTR,CDS3.799863.63953HepG2IGF2BP3
chr14445660044456763+3'-UTR4.115698.76110HepG2UPF1
chr14445665144456805+3'-UTR5.475407.68318K562DDX6
chr14445656144456767+3'-UTR3.577345.25366HepG2GRSF1
chr14444501944445158+5'-UTR,intron-Distal4.5529611.60568HepG2UPF1
chr14444578644445825+5'-UTR,intron-Distal,intron-Proximal5.8340310.49187K562EIF4G2
chr14444582544445926+5'-UTR,intron-Distal6.1634429.09844K562EIF4G2
chr14444501244445162+5'-UTR,intron-Distal4.045475.59033HepG2FTO
chr14444518244445239+5'-UTR,intron-Distal,intron-Proximal3.757613.99908K562BUD13
chr14444518044445231+5'-UTR,intron-Distal,intron-Proximal4.663765.90930HepG2AQR
chr14444591744445968+5'-UTR,intron-Distal3.916114.98250K562AQR
chr14444576644445823+5'-UTR,intron-Distal,intron-Proximal5.6676314.35493K562TARDBP
chr14444566544445766+5'-UTR,CDS,intron-Distal,intron-Proximal3.8029111.16985K562TARDBP
chr14444510744445185+5'-UTR,intron-Distal,intron-Proximal4.8607525.75075HepG2DDX3X
chr14444582344445877+5'-UTR,intron-Distal4.5066711.06924K562TARDBP
chr14444490744445002+5'-UTR,intron-Distal4.6498834.87423HepG2DDX3X
chr14444677944446893+5'-UTR,CDS,intron-Proximal4.8239727.84158HepG2DDX3X
chr14444511544445168+5'-UTR,intron-Distal4.257173.87930K562UPF1
chr14444518244445205+5'-UTR,intron-Distal,intron-Proximal4.9974315.45935K562AQR
chr14444504644445145+5'-UTR,intron-Distal4.106228.65983K562GEMIN5
chr14444673944446883+5'-UTR,CDS,intron-Proximal4.0228413.63842K562AQR
chr14444501944445107+5'-UTR,intron-Distal5.3787221.71690HepG2DDX3X
chr14444568244445723+5'-UTR,CDS,intron-Distal,intron-Proximal3.364735.06354K562EIF4G2
chr14444670844446785+5'-UTR,CDS,intron-Proximal4.896916.74224HepG2AQR
chr14444574344445821+5'-UTR,intron-Distal,intron-Proximal3.384435.32296K562PRPF8
chr14445112044451198+CDS,intron-Proximal5.1268115.61414K562EFTUD2
chr14445051744450582+CDS,intron-Proximal5.268387.81430K562AQR
chr14445111644451199+CDS,intron-Proximal5.103135.00483K562GPKOW
chr14445606844456116+CDS4.398814.96452K562YBX3
chr14445070544450762+CDS,intron-Proximal5.630257.36776HepG2PRPF8
chr14445114144451222+CDS,intron-Proximal4.385417.53589K562AQR
chr14445112644451280+CDS,intron-Proximal3.105235.05690K562BUD13
chr14444745344447535+CDS5.4668313.66432K562YBX3
chr14444711344447180+CDS,intron-Proximal4.157474.45914HepG2PRPF8
chr14445116244451206+CDS,intron-Proximal4.9428117.68434HepG2EFTUD2
chr14445112844451251+CDS,intron-Proximal3.574997.25157HepG2AQR
chr14445592244455983+CDS,intron-Proximal4.889204.90235K562SF3B4
chr14445114444451216+CDS,intron-Proximal3.629329.39957HepG2PRPF8
chr14444749744447591+CDS3.855948.44412K562METAP2
chr14445113544451224+CDS,intron-Proximal3.017036.50635HepG2BUD13
chr14445044744450543+CDS,intron-Proximal4.065504.07325HepG2SF3B4
chr14444753544447596+CDS3.362658.79436K562YBX3
chr14444736544447423+CDS,intron-Proximal4.260964.10604K562METAP2
chr14445113844451207+CDS,intron-Proximal5.1145019.70105K562SF3B4
chr14444857644448623+intron-Distal5.138506.75320K562AQR
chr14444658944446699+intron-Distal,intron-Proximal4.936978.14280K562TARDBP
chr14444770044447784+intron-Distal3.627144.58287K562PRPF8
chr14444547044445529+intron-Distal4.016737.39675K562EIF4G2
chr14444660944446630+intron-Distal4.913164.67055K562EIF4G2
chr14444667244446727+intron-Distal,intron-Proximal3.569847.81398K562EIF4G2
chr14444645744446589+intron-Distal4.364499.57947K562TARDBP
chr14444520544445227+intron-Distal,intron-Proximal5.2683820.71396K562AQR
chr14445131244451498+intron-Distal,intron-Proximal3.425633.45841K562HNRNPK
chr14445010844450243+intron-Distal3.876854.75435K562EFTUD2
chr14445133544451418+intron-Distal,intron-Proximal4.303034.07750HepG2HNRNPK
chr14445049644450537+intron-Proximal4.430434.22551K562SF3B4
chr14445113444451162+intron-Proximal5.7808317.58071HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for B4GALT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for B4GALT2 is not available on ENCORE database.

  • 94 RBPs can affect the levels of B4GALT2.  








The Knockdown/knockout RNA-Seq assay for B4GALT2 is not available on ENCORE database.





94 RBPs can affect the gene expression of B4GALT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
B4GALT2ENSG00000117411.12968.680501142.69180-0.238302.295001.73160HepG2ACO1
B4GALT2ENSG00000117411.12976.310201686.64210-0.788705.431204.71510HepG2AKAP1
B4GALT2ENSG00000117411.12907.868601395.46260-0.620205.429404.34600HepG2ASCC1
B4GALT2ENSG00000117411.12630.19670835.05330-0.406103.214602.38920HepG2CALR
B4GALT2ENSG00000117411.12725.890401142.35090-0.6542013.5572012.31470HepG2CKAP4
B4GALT2ENSG00000117411.12666.25090491.204500.439603.959502.73960HepG2YBX3
B4GALT2ENSG00000117411.12465.69860904.15370-0.9572017.9642016.61260HepG2CELF1
B4GALT2ENSG00000117411.12923.872401093.22250-0.242802.081901.48190HepG2DKC1
B4GALT2ENSG00000117411.12810.21600482.317800.7482011.056209.72680HepG2DNAJC21
B4GALT2ENSG00000117411.12877.263101334.04290-0.604704.986804.20390HepG2EIF2S1
B4GALT2ENSG00000117411.121148.247401474.05060-0.360402.294301.70980HepG2EIF4A3
B4GALT2ENSG00000117411.121086.951201572.53250-0.532802.928102.13650HepG2FIP1L1
B4GALT2ENSG00000117411.12885.088301229.43040-0.474104.777103.76010HepG2FUBP3
B4GALT2ENSG00000117411.121052.333101379.91900-0.391002.384001.76330HepG2G3BP1
B4GALT2ENSG00000117411.121217.412301013.972400.263702.491201.80920HepG2HNRNPF
B4GALT2ENSG00000117411.12866.27390538.051900.6870011.1974010.04580HepG2HNRNPU
B4GALT2ENSG00000117411.121309.41770998.470600.391003.787902.95200HepG2IGF2BP1
B4GALT2ENSG00000117411.12806.628401316.72460-0.707002.201001.33350HepG2IGF2BP3
B4GALT2ENSG00000117411.12670.48670549.601600.286702.514601.81170HepG2ILF2
B4GALT2ENSG00000117411.122001.745601291.441000.632203.957502.96050HepG2LARP4
B4GALT2ENSG00000117411.12960.738101496.67490-0.639505.918005.02090HepG2MATR3
B4GALT2ENSG00000117411.121172.422401531.84050-0.385802.708902.08200HepG2NCBP2
B4GALT2ENSG00000117411.12949.37000647.584300.551803.042601.52070HepG2NOLC1
B4GALT2ENSG00000117411.121131.034501398.40930-0.306103.629002.95380HepG2PCBP1
B4GALT2ENSG00000117411.12870.15560479.898600.8584013.5667012.01080HepG2PPIL4
B4GALT2ENSG00000117411.12801.59570977.53920-0.286302.603101.85100HepG2PRPF4
B4GALT2ENSG00000117411.12216.06980533.52210-1.304105.546504.44470HepG2PRPF8
B4GALT2ENSG00000117411.12912.986301422.92560-0.6402012.9282011.91920HepG2PTBP1
B4GALT2ENSG00000117411.121282.26140920.226700.478504.946204.17700HepG2PUF60
B4GALT2ENSG00000117411.121248.55500976.868400.353905.186604.42660HepG2PUM1
B4GALT2ENSG00000117411.12875.052001163.89220-0.411505.792204.96040HepG2PUS1
B4GALT2ENSG00000117411.121109.856301541.08100-0.473606.281105.39430HepG2QKI
B4GALT2ENSG00000117411.12357.10880603.98820-0.758201.999001.39000HepG2RAVER1
B4GALT2ENSG00000117411.121105.430601477.74330-0.418805.321704.66160HepG2RBM22
B4GALT2ENSG00000117411.12938.274301398.62350-0.575907.331306.27820HepG2RBM25
B4GALT2ENSG00000117411.12771.679101583.58640-1.0371029.6825028.30610HepG2NELFE
B4GALT2ENSG00000117411.121054.437401474.88310-0.484107.815706.85790HepG2RECQL
B4GALT2ENSG00000117411.12253.43910527.72070-1.058104.532703.55680HepG2RRP9
B4GALT2ENSG00000117411.121013.18240479.156701.0802028.1647026.42120HepG2SAFB2
B4GALT2ENSG00000117411.121152.15510930.784000.307702.035801.42550HepG2SF3B1
B4GALT2ENSG00000117411.121022.292601481.46390-0.535209.269308.28420HepG2SF3B4
B4GALT2ENSG00000117411.121110.20020882.368500.331304.090403.26110HepG2SLBP
B4GALT2ENSG00000117411.12739.84110558.773800.404904.480803.69750HepG2SMN1
B4GALT2ENSG00000117411.12952.47580453.569901.070303.745902.16680HepG2SNRNP200
B4GALT2ENSG00000117411.12567.791001035.67780-0.867106.549105.33810HepG2SNRNP70
B4GALT2ENSG00000117411.121375.806401669.04090-0.278703.680103.12740HepG2SRFBP1
B4GALT2ENSG00000117411.12657.820901546.32160-1.2331041.7686040.40860HepG2SRSF1
B4GALT2ENSG00000117411.121066.25860908.598300.230702.023101.47740HepG2SRSF5
B4GALT2ENSG00000117411.12865.746901258.00980-0.539109.493508.57780HepG2SRSF9
B4GALT2ENSG00000117411.121234.956001449.09520-0.230702.403701.91860HepG2SSB
B4GALT2ENSG00000117411.12934.923801389.87750-0.572008.048207.17190HepG2TAF15
B4GALT2ENSG00000117411.121251.69150916.843800.449003.799902.96570HepG2TARDBP
B4GALT2ENSG00000117411.12878.662501277.12570-0.539506.859605.54880HepG2TIA1
B4GALT2ENSG00000117411.12690.99100522.803200.402303.234402.70030HepG2TIAL1
B4GALT2ENSG00000117411.121112.44350527.492601.0764028.7271027.14900HepG2TRIM56
B4GALT2ENSG00000117411.121159.62650899.034100.367102.942602.03860HepG2TUFM
B4GALT2ENSG00000117411.12819.620401344.92510-0.714507.464706.43930HepG2U2AF1
B4GALT2ENSG00000117411.12543.14360964.72850-0.8288017.5977016.16090HepG2ZC3H8
B4GALT2ENSG00000117411.121538.376301308.866300.233002.084301.57900K562AGGF1
B4GALT2ENSG00000117411.121247.245901812.65510-0.539406.046805.23660K562AQR
B4GALT2ENSG00000117411.12627.067001001.92620-0.676103.205502.26500K562BOP1
B4GALT2ENSG00000117411.121213.27600936.191700.373902.842801.77040K562CCAR1
B4GALT2ENSG00000117411.122072.996601655.178400.324603.953502.62060K562CPEB4
B4GALT2ENSG00000117411.122084.365402670.15980-0.357304.556803.29510K562CELF1
B4GALT2ENSG00000117411.121001.84150762.364200.394003.366002.20180K562DDX3X
B4GALT2ENSG00000117411.122520.062001712.837900.5570012.7588011.46680K562DDX47
B4GALT2ENSG00000117411.121163.444201536.84750-0.401605.314804.36470K562EIF2S2
B4GALT2ENSG00000117411.121480.41580952.243700.636503.902902.68460K562EIF3A
B4GALT2ENSG00000117411.12736.56550439.909900.743509.260407.81010K562EIF3G
B4GALT2ENSG00000117411.12941.83120717.187900.393003.805502.41890K562EIF4B
B4GALT2ENSG00000117411.121694.296402171.37970-0.357905.054803.80220K562EIF4G2
B4GALT2ENSG00000117411.121809.184001206.443100.584507.210905.78120K562FIP1L1
B4GALT2ENSG00000117411.12683.072201084.00710-0.666303.853702.83800K562FMR1
B4GALT2ENSG00000117411.12637.90100918.84320-0.526504.023702.90670K562FTO
B4GALT2ENSG00000117411.12280.88470388.90660-0.469402.971501.57320K562FUS
B4GALT2ENSG00000117411.121102.67870828.250900.412804.528603.78140K562FXR1
B4GALT2ENSG00000117411.1299.22570345.48680-1.7998016.9388014.81640K562G3BP2
B4GALT2ENSG00000117411.122821.435002047.996100.462105.996404.87920K562GRSF1
B4GALT2ENSG00000117411.12735.020401033.06420-0.491103.834603.14600K562HNRNPC
B4GALT2ENSG00000117411.121504.74470992.371400.600505.694804.29480K562HNRNPM
B4GALT2ENSG00000117411.12921.24510654.860400.492303.175502.05040K562IGF2BP2
B4GALT2ENSG00000117411.121048.158301445.43690-0.463602.995002.13460K562KIF1C
B4GALT2ENSG00000117411.12582.82180868.53970-0.575502.757201.82640K562KRR1
B4GALT2ENSG00000117411.12934.36250687.940200.441603.933402.92410K562MAGOH
B4GALT2ENSG00000117411.12951.13950686.500200.470304.568703.35490K562MATR3
B4GALT2ENSG00000117411.121800.105202314.42820-0.362603.496102.22620K562MSI2
B4GALT2ENSG00000117411.12778.492501134.95770-0.543903.747602.68080K562NAA15
B4GALT2ENSG00000117411.12441.20410612.04310-0.472203.217502.16200K562PCBP2
B4GALT2ENSG00000117411.121177.275001735.73850-0.560104.007403.00560K562PCBP3
B4GALT2ENSG00000117411.12948.687801331.31120-0.488805.269804.16560K562POLR2G
B4GALT2ENSG00000117411.122021.740701369.630500.561706.623905.25760K562PPIG
B4GALT2ENSG00000117411.121135.90020668.398900.7650011.8176010.50040K562PTBP1
B4GALT2ENSG00000117411.121949.856502369.10150-0.281002.299601.55600K562PUF60
B4GALT2ENSG00000117411.12978.255601350.87680-0.465602.809102.26270K562PUS1
B4GALT2ENSG00000117411.12806.84980640.755000.332402.176601.43550K562RBM22
B4GALT2ENSG00000117411.121213.86580818.193300.569004.316403.29210K562RPS19
B4GALT2ENSG00000117411.121433.287701749.46790-0.287603.378402.48190K562SF3A3
B4GALT2ENSG00000117411.12741.56220967.40250-0.383502.267201.39700K562SF3B1
B4GALT2ENSG00000117411.12500.63330359.450300.477903.323602.38480K562SF3B4
B4GALT2ENSG00000117411.121653.26340991.241400.737903.311801.83740K562SFPQ
B4GALT2ENSG00000117411.121081.11620801.544300.431602.842001.80000K562SRFBP1
B4GALT2ENSG00000117411.12831.43540525.020900.663102.290701.34920K562SRSF4
B4GALT2ENSG00000117411.12173.40510339.15320-0.967804.707502.62110K562TAF15
B4GALT2ENSG00000117411.121268.16500663.122000.935308.588207.25240K562TARDBP
B4GALT2ENSG00000117411.12935.14420639.674700.547805.825604.57090K562TIA1
B4GALT2ENSG00000117411.121557.70480946.964900.717907.440105.71730K562TRIM56
B4GALT2ENSG00000117411.12216.80040335.11930-0.628302.876301.75870K562U2AF1
B4GALT2ENSG00000117411.12202.81560346.02990-0.770706.001004.82200K562U2AF2
B4GALT2ENSG00000117411.121252.882301608.69560-0.360603.454302.47900K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for B4GALT2 is not available on ENCORE database.





4 RBPs can affect the splicing of B4GALT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEB4GALT2ENSG00000117411.12chr1+444511884445142044450949444510724445596944456839-0.054000.001420.02760excludedHepG2U2AF1
SEB4GALT2ENSG00000117411.12chr1+444461044444628644444865444451834444678044447145-0.304000.001800.04937excludedK562AKAP8L
A5SSB4GALT2ENSG00000117411.12chr1+4445118844451420444511884445129344455969444561510.080000.000130.01537longerHepG2SF3A3
A5SSB4GALT2ENSG00000117411.12chr1+4445118844451420444511884445129344455969444561510.070000.000010.00299longerK562HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for B4GALT2 is not avaliable on ENCORE database.