ASAP3

General Information

Gene Name       : ASAP3
Gene ID             : ENSG00000088280.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ASAP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ASAP3ENSG00000088280.180.480.230.35ENCSR000AEF
HepG2ASAP3ENSG00000088280.1821.8520.7921.32ENCSR985KAT
K562ASAP3ENSG00000088280.1816.1414.3215.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ASAP3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ASAP3 RNA is bound by 14 proteins.  







eCLIP assay for ASAP3 is not avaliable on ENCORE database.





14 proteins are bound to ASAP3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12376529723765387-3'-UTR,CDS,intron-Distal,intron-Proximal4.408236.59856K562SF3B4
chr12376899323769087-3'-UTR,CDS,intron-Distal,intron-Proximal3.598513.04123K562LIN28B
chr12376560723765661-3'-UTR,CDS,intron-Distal,intron-Proximal3.716535.35401HepG2PRPF8
chr12375973823759754-3'-UTR,CDS,intron-Distal4.173684.08604HepG2PPIG
chr12376791623768011-3'-UTR,CDS,intron-Distal,intron-Proximal4.063165.63851K562SF3B4
chr12376011823760156-3'-UTR,CDS,intron-Distal,intron-Proximal3.144236.61676HepG2PPIG
chr12377919023779232-3'-UTR,CDS,intron-Distal3.988365.73400HepG2PPIG
chr12376768623767736-3'-UTR,CDS,intron-Distal,intron-Proximal4.062086.80869K562AQR
chr12375972723759825-3'-UTR,CDS,intron-Distal,intron-Proximal4.563588.48965K562EFTUD2
chr12376561823765713-3'-UTR,CDS,intron-Distal,intron-Proximal3.732515.23469HepG2AQR
chr12376524323765316-3'-UTR,CDS,intron-Distal4.8397812.90078HepG2PPIG
chr12378249523782520-3'-UTR,CDS,intron-Distal,intron-Proximal4.328177.49899HepG2PPIG
chr12376081723760860-3'-UTR,CDS,intron-Distal3.021913.91443HepG2PPIG
chr12376392223763963-3'-UTR,CDS,intron-Distal3.124545.21025HepG2PPIG
chr12375570323755779-3'-UTR,intron-Distal3.226666.37005K562UPF1
chr12376781423767882-3'-UTR,CDS,intron-Distal,intron-Proximal5.4186116.41423K562AQR
chr12375815023758207-3'-UTR,CDS,intron-Distal,intron-Proximal4.389947.13970HepG2PRPF8
chr12376905323769105-3'-UTR,CDS,intron-Distal3.002333.50686HepG2PPIG
chr12375524223755312-3'-UTR,intron-Distal5.206347.60978K562UPF1
chr12376358223763650-3'-UTR,CDS,intron-Distal,intron-Proximal3.903368.16617HepG2PRPF8
chr12376075123760782-3'-UTR,CDS,intron-Distal3.130934.39623HepG2PPIG
chr12376789423767967-3'-UTR,CDS,intron-Distal,intron-Proximal4.305923.82000HepG2GRWD1
chr12376110223761164-3'-UTR,CDS,intron-Distal,intron-Proximal5.006434.40745K562SF3B4
chr12376232223762420-3'-UTR,CDS,intron-Distal,intron-Proximal3.284904.11060HepG2SRSF1
chr12376872623768760-3'-UTR,CDS,intron-Distal3.591933.93645HepG2PPIG
chr12378261423782654-3'-UTR,CDS,intron-Distal,intron-Proximal5.4377010.63730HepG2PPIG
chr12376788823767962-3'-UTR,CDS,intron-Distal3.305439.44064HepG2PPIG
chr12375557123755616-3'-UTR,intron-Distal3.939174.50550K562UPF1
chr12376788423767965-3'-UTR,CDS,intron-Distal3.066133.80732K562ZNF622
chr12376221823762296-5'-UTR,intron-Distal,intron-Proximal3.524169.36850HepG2U2AF2
chr12375814523758180-intron-Distal,intron-Proximal5.653079.95272K562AQR
chr12377902123779123-intron-Distal,intron-Proximal4.197374.49024K562AQR
chr12376111723761168-intron-Distal,intron-Proximal3.911789.15895HepG2SF3B4
chr12377903723779133-intron-Distal,intron-Proximal4.502794.59919HepG2AQR
chr12376111223761215-intron-Distal,intron-Proximal3.110413.29499HepG2PRPF4
chr12376779823767853-intron-Distal,intron-Proximal3.957163.18234K562BUD13
chr12376781223767873-intron-Distal,intron-Proximal5.268676.26248HepG2PRPF8
chr12375976823759818-intron-Distal,intron-Proximal5.200714.69961K562SF3B4
chr12376130723761469-intron-Distal3.850233.43967HepG2TAF15
chr12375818023758188-intron-Distal,intron-Proximal5.566319.41643K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ASAP3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ASAP3 is not available on ENCORE database.

  • 94 RBPs can affect the levels of ASAP3.  








The Knockdown/knockout RNA-Seq assay for ASAP3 is not available on ENCORE database.





94 RBPs can affect the gene expression of ASAP3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ASAP3ENSG00000088280.14754.09750574.158000.393202.559301.60010HepG2ADAR
ASAP3ENSG00000088280.14553.863501293.10730-1.2232016.6476015.45530HepG2AKAP1
ASAP3ENSG00000088280.141449.513701069.919300.438003.437602.56270HepG2ASCC1
ASAP3ENSG00000088280.14461.39970596.75990-0.371102.227801.42090HepG2BCLAF1
ASAP3ENSG00000088280.14427.05040570.96250-0.419002.730301.96370HepG2CALR
ASAP3ENSG00000088280.141318.402301016.503000.375102.664901.90550HepG2CIRBP
ASAP3ENSG00000088280.14516.87590794.71530-0.620603.331002.48490HepG2CNOT7
ASAP3ENSG00000088280.14396.44080521.18500-0.394702.180101.56050HepG2CPSF6
ASAP3ENSG00000088280.14672.95790937.11420-0.477705.466604.61890HepG2CELF1
ASAP3ENSG00000088280.14749.130001007.56030-0.427605.766004.75160HepG2DAZAP1
ASAP3ENSG00000088280.14853.726301238.65950-0.536904.500603.71750HepG2DDX3X
ASAP3ENSG00000088280.14421.76670675.42320-0.679304.394103.44190HepG2DDX55
ASAP3ENSG00000088280.14951.77690777.538300.291602.551601.89780HepG2DKC1
ASAP3ENSG00000088280.14382.60630573.04010-0.582806.995706.02530HepG2DNAJC2
ASAP3ENSG00000088280.14375.609801022.87890-1.4453023.3848021.77250HepG2EIF2S1
ASAP3ENSG00000088280.14338.94990537.44270-0.665004.569303.42920HepG2EIF3D
ASAP3ENSG00000088280.14736.290501130.35690-0.618405.024704.16690HepG2EIF4A3
ASAP3ENSG00000088280.14818.786801100.64620-0.426802.241301.61860HepG2EIF4B
ASAP3ENSG00000088280.14533.11500794.18110-0.575005.781904.57030HepG2EWSR1
ASAP3ENSG00000088280.14481.12630768.30320-0.675306.923205.71480HepG2FUBP3
ASAP3ENSG00000088280.141067.67890590.774400.853709.064207.94810HepG2GPKOW
ASAP3ENSG00000088280.14826.51490583.691100.501704.272903.49380HepG2HNRNPA1
ASAP3ENSG00000088280.14632.35110926.00940-0.550307.044205.67150HepG2HNRNPA2B1
ASAP3ENSG00000088280.14381.11110649.24610-0.768607.276006.19360HepG2HNRNPC
ASAP3ENSG00000088280.14748.367301071.50600-0.517804.546403.67040HepG2HNRNPK
ASAP3ENSG00000088280.14698.94960917.78980-0.393004.695903.83400HepG2HNRNPL
ASAP3ENSG00000088280.14965.86270563.789500.776608.239707.21570HepG2HNRNPLL
ASAP3ENSG00000088280.14974.10050644.953900.594809.283008.22130HepG2HNRNPU
ASAP3ENSG00000088280.14885.27130722.182400.293702.012801.38830HepG2IGF2BP1
ASAP3ENSG00000088280.141398.484301075.428100.378902.778502.10220HepG2IGF2BP2
ASAP3ENSG00000088280.14510.78220658.79940-0.367102.466001.77000HepG2ILF2
ASAP3ENSG00000088280.14518.83470693.60200-0.418803.031801.84180HepG2LARP7
ASAP3ENSG00000088280.14390.50900587.25100-0.588604.512302.49750HepG2MARK2
ASAP3ENSG00000088280.14721.902001174.39000-0.702006.868005.89020HepG2NCBP2
ASAP3ENSG00000088280.14780.54910999.09830-0.356102.916502.13350HepG2NOL12
ASAP3ENSG00000088280.14737.45100499.928700.560704.320203.39100HepG2NSUN2
ASAP3ENSG00000088280.14602.094001045.78890-0.796508.478007.22940HepG2PABPC4
ASAP3ENSG00000088280.14758.326101022.19980-0.430805.545404.73270HepG2PCBP1
ASAP3ENSG00000088280.14848.69250682.770800.313702.559001.81240HepG2PRPF4
ASAP3ENSG00000088280.14679.486901040.07680-0.614209.693608.79210HepG2PTBP1
ASAP3ENSG00000088280.141365.46440953.745500.517605.903005.07660HepG2PUF60
ASAP3ENSG00000088280.14631.850901012.46480-0.6802013.1981012.10640HepG2PUM1
ASAP3ENSG00000088280.14902.068201126.53480-0.320602.141001.57990HepG2QKI
ASAP3ENSG00000088280.14247.94090614.53140-1.309509.605408.34530HepG2RAVER1
ASAP3ENSG00000088280.14977.165501180.06800-0.272202.398901.90680HepG2RBM22
ASAP3ENSG00000088280.14583.662601022.36270-0.8087011.7125010.38460HepG2RBM25
ASAP3ENSG00000088280.14633.22420790.09780-0.319302.068701.46810HepG2RPLP0
ASAP3ENSG00000088280.14300.22010515.09110-0.778806.133605.01240HepG2RRP9
ASAP3ENSG00000088280.14465.07150574.36130-0.304502.243801.65310HepG2SAFB2
ASAP3ENSG00000088280.14476.12850751.91330-0.659204.658802.96300HepG2SART3
ASAP3ENSG00000088280.14625.55370994.59650-0.669004.983804.06090HepG2SF3A3
ASAP3ENSG00000088280.14324.67920558.02330-0.781306.735105.67560HepG2SF3B1
ASAP3ENSG00000088280.14689.054701082.94340-0.6523010.997309.93840HepG2SF3B4
ASAP3ENSG00000088280.14562.312101332.83710-1.2451040.6370039.30410HepG2SRFBP1
ASAP3ENSG00000088280.14952.286101130.32200-0.247302.367601.92100HepG2SRSF1
ASAP3ENSG00000088280.14419.20100600.48330-0.518502.791201.78490HepG2SRSF3
ASAP3ENSG00000088280.141127.37540919.545800.293902.869402.30990HepG2SRSF9
ASAP3ENSG00000088280.141610.574901157.207300.476808.543107.73930HepG2SSB
ASAP3ENSG00000088280.14446.33750590.02890-0.402702.889501.92780HepG2SUPT6H
ASAP3ENSG00000088280.14768.16690626.701900.293501.980301.54220HepG2TIAL1
ASAP3ENSG00000088280.14474.09160632.29480-0.415404.058103.40160HepG2TRIM56
ASAP3ENSG00000088280.14469.02150747.46990-0.672405.742604.85460HepG2U2AF1
ASAP3ENSG00000088280.141165.08010882.056100.401405.435204.50770HepG2UPF1
ASAP3ENSG00000088280.14972.86910615.385300.660703.640702.47700HepG2UPF2
ASAP3ENSG00000088280.14887.46940661.796500.423202.075501.43950HepG2XRN2
ASAP3ENSG00000088280.14562.95560673.81400-0.259301.974101.39200HepG2ZC3H8
ASAP3ENSG00000088280.14787.75850970.09140-0.300403.318402.73570HepG2ZNF622
ASAP3ENSG00000088280.14476.918501014.24140-1.0886015.3766014.14580K562AQR
ASAP3ENSG00000088280.14581.35060416.061300.482502.914301.45250K562BUD13
ASAP3ENSG00000088280.14493.09920337.689000.546104.098703.14450K562CPSF6
ASAP3ENSG00000088280.141071.58880769.483700.477704.916103.47310K562DDX3X
ASAP3ENSG00000088280.141040.19810780.152900.414904.589902.76690K562DDX6
ASAP3ENSG00000088280.14286.61520561.46220-0.970108.367506.20920K562EEF2
ASAP3ENSG00000088280.14362.85650542.40820-0.580004.319303.16140K562EFTUD2
ASAP3ENSG00000088280.14332.80570580.62890-0.802906.634704.94120K562EIF3D
ASAP3ENSG00000088280.14575.05240803.91760-0.483403.999603.01440K562EIF4A3
ASAP3ENSG00000088280.14867.707601192.03510-0.458105.882504.53400K562EIF4G2
ASAP3ENSG00000088280.14382.12200534.08390-0.483002.875701.72550K562FKBP4
ASAP3ENSG00000088280.14634.82200343.555200.885708.970607.38450K562FMR1
ASAP3ENSG00000088280.14400.29050291.178700.459002.337201.50190K562FTO
ASAP3ENSG00000088280.14379.64050836.04000-1.1389022.6464021.03320K562FXR1
ASAP3ENSG00000088280.14341.12400487.43010-0.514902.658001.96840K562G3BP2
ASAP3ENSG00000088280.14513.22820322.424400.670505.388404.28680K562GPKOW
ASAP3ENSG00000088280.14321.70180614.74910-0.9343010.700209.59000K562HNRNPC
ASAP3ENSG00000088280.14385.91800672.48100-0.801203.733402.27620K562HNRNPK
ASAP3ENSG00000088280.141375.86650986.517400.479806.406305.03680K562HNRNPU
ASAP3ENSG00000088280.141082.18400582.123500.8944012.1365010.50130K562HSPD1
ASAP3ENSG00000088280.141031.02640674.084100.613003.651902.41080K562IGF2BP2
ASAP3ENSG00000088280.14460.08420314.716100.547703.699102.67630K562METAP2
ASAP3ENSG00000088280.141145.20610908.692800.333604.573003.64270K562NSUN2
ASAP3ENSG00000088280.14409.58780629.66310-0.620402.587201.64180K562PCBP2
ASAP3ENSG00000088280.14485.20930633.20280-0.384102.695601.90660K562POLR2G
ASAP3ENSG00000088280.14158.83250527.82880-1.7326023.5565021.35450K562PRPF8
ASAP3ENSG00000088280.14478.51950687.73000-0.523302.017501.43340K562PTBP1
ASAP3ENSG00000088280.14808.727701300.57410-0.685409.078107.58660K562PUF60
ASAP3ENSG00000088280.14431.14520659.10990-0.612302.539201.73760K562RBM22
ASAP3ENSG00000088280.14376.10020564.25290-0.585204.656503.24470K562SAFB
ASAP3ENSG00000088280.14404.58470583.34800-0.527903.853902.12980K562SDAD1
ASAP3ENSG00000088280.141071.09890896.755900.256202.193901.46060K562SF3A3
ASAP3ENSG00000088280.14341.89720506.59800-0.567304.567203.45790K562SF3B4
ASAP3ENSG00000088280.14756.32570918.75560-0.280702.520301.62140K562SRPK2
ASAP3ENSG00000088280.14884.59950636.975100.473702.803601.74580K562SRSF5
ASAP3ENSG00000088280.14359.51510635.14260-0.821009.959208.39440K562SYNCRIP
ASAP3ENSG00000088280.14912.51860658.155500.471303.045402.17850K562TIA1
ASAP3ENSG00000088280.14726.15530502.152900.532104.068102.29360K562TRIP6
ASAP3ENSG00000088280.14337.03860472.20420-0.486502.651801.58520K562U2AF1
ASAP3ENSG00000088280.14238.52320487.77380-1.0321012.5627010.83650K562U2AF2
ASAP3ENSG00000088280.14834.73250540.794900.626105.322903.86810K562UCHL5
ASAP3ENSG00000088280.141292.37830963.512000.423606.308005.27580K562UPF1
ASAP3ENSG00000088280.141102.16080824.437400.418803.827502.79300K562WDR3
ASAP3ENSG00000088280.141575.339201202.035000.390103.917702.37040K562WRN
ASAP3ENSG00000088280.14747.51880550.809200.440502.818701.59940K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ASAP3 is not available on ENCORE database.





12 RBPs can affect the splicing of ASAP3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEASAP3ENSG00000088280.14chr1-237656532376572323765239237653272376759423767704-0.217000.003560.05802excludedHepG2U2AF1
SEASAP3ENSG00000088280.14chr1-237656532376572323765239237653272376759423767704-0.542000.000000.00000excludedHepG2U2AF2
SEASAP3ENSG00000088280.14chr1-237656532376572323765239237653272376759423767704-0.137000.001050.07309excludedHepG2DDX3X
SEASAP3ENSG00000088280.14chr1-237779712377802123768993237691052377918923779264-0.122000.001680.06959excludedHepG2SF3B4
SEASAP3ENSG00000088280.14chr1-237656532376572323765239237653272376759423767704-0.110000.001720.07071excludedHepG2SF3B4
SEASAP3ENSG00000088280.14chr1-237656532376572323765239237653272376759423767704-0.169000.002050.03467excludedK562HNRNPC
A3SSASAP3ENSG00000088280.14chr1-2376814723768338237681472376822323768678237687640.272000.000050.00976longerHepG2PCBP1
A5SSASAP3ENSG00000088280.14chr1-2375985423760025237599172376002523759569237597650.177000.001390.05053longerK562PUS1
A5SSASAP3ENSG00000088280.14chr1-2376221523762521237623432376252123761025237611110.411000.000000.00010longerHepG2SRSF9
A5SSASAP3ENSG00000088280.14chr1-2375985423760025237599172376002523759569237597650.191000.000530.04894longerK562AGGF1
A5SSASAP3ENSG00000088280.14chr1-2376221523762521237623432376252123761025237611110.421000.000010.00147longerHepG2HNRNPK
A5SSASAP3ENSG00000088280.14chr1-2375985423760025237599172376002523759569237597650.186000.000490.04776longerK562UTP18
MXEASAP3ENSG00000088280.14chr1-2376221523762289237623432376252123761025237611112376305223763147-0.206000.000160.006262includedHepG2HNRNPK
MXEASAP3ENSG00000088280.14chr1-2376221523762289237623432376252123761025237611112376305223763147-0.177000.005350.078622includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ASAP3 is not avaliable on ENCORE database.