ALG3

General Information

Gene Name : ALG3
Gene ID : ENSG00000214160.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ALG3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ALG3	ENSG00000214160.9	16.09	24.52	20.30	ENCSR000AEF
HepG2	ALG3	ENSG00000214160.9	53.42	31.79	42.61	ENCSR985KAT
K562	ALG3	ENSG00000214160.9	87.04	68.95	78.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ALG3 is not avaliable on ENCORE database.

Proteins bound to RNA

ALG3 RNA is bound by 14 proteins.

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eCLIP assay for ALG3 is not avaliable on ENCORE database.

14 proteins are bound to ALG3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	183962502	183962538	-	3'-UTR,CDS,intron-Distal,intron-Proximal	7.06901	46.24730	K562	AQR
chr3	183962940	183962986	-	intron-Distal,intron-Proximal	6.20617	37.31710	K562	AQR
chr3	183962486	183962502	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.71358	36.95654	K562	AQR
chr3	183962538	183962542	-	intron-Distal,intron-Proximal	6.68288	35.32125	K562	AQR
chr3	183966630	183966724	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.84373	30.53441	HepG2	DDX3X
chr3	183962894	183962940	-	intron-Distal,intron-Proximal	6.28459	30.42534	K562	AQR
chr3	183960599	183960656	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.49609	25.39759	K562	IGF2BP2
chr3	183960656	183960713	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.49259	23.43995	K562	IGF2BP2
chr3	183966561	183966630	-	CDS,intron-Distal	4.15691	22.81741	HepG2	DDX3X
chr3	183960409	183960464	-	3'-UTR,CDS,intron-Distal	4.40572	21.14295	K562	IGF2BP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 49 entries

eCLIP assay for ALG3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ALG3 is not available on ENCORE database.
92 RBPs can affect the levels of ALG3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ALG3 is not available on ENCORE database.

92 RBPs can affect the gene expression of ALG3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ALG3	ENSG00000214160.5	555.95030	906.87050	-0.70590	12.23050	11.21640	HepG2	SRSF9
ALG3	ENSG00000214160.5	780.04060	1209.47200	-0.63280	11.83240	10.98890	HepG2	SRFBP1
ALG3	ENSG00000214160.5	618.05580	973.11410	-0.65490	11.84320	10.61500	HepG2	ZC3H8
ALG3	ENSG00000214160.5	1769.61290	1088.61450	0.70080	11.70380	9.63280	K562	RCC2
ALG3	ENSG00000214160.5	1135.92330	676.83040	0.74690	10.68290	9.30480	K562	SRSF1
ALG3	ENSG00000214160.5	897.92080	531.58370	0.75620	10.82520	9.07630	K562	SF3B4
ALG3	ENSG00000214160.5	1691.64470	1031.95990	0.71290	10.18940	7.86190	K562	SRFBP1
ALG3	ENSG00000214160.5	1188.45900	836.48680	0.50660	8.88430	7.82330	HepG2	CKAP4
ALG3	ENSG00000214160.5	1936.11920	1219.18760	0.66710	9.52180	7.50840	K562	TRIM56
ALG3	ENSG00000214160.5	1669.00470	2348.47830	-0.49270	9.00530	7.34870	K562	EIF4G2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 101 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ALG3 is not available on ENCORE database.

10 RBPs can affect the splicing of ALG3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ALG3	ENSG00000214160.5	chr3	-	183961578	183961784			183961341	183961418	183962388	183962439	-0.12200	0.00000	0.00002	excluded	HepG2	U2AF1
MXE	ALG3	ENSG00000214160.5	chr3	-	183962388	183962509	183962985	183963146	183961341	183961418	183963255	183963403	-0.06800	0.00002	0.00129	2included	K562	PRPF8
SE	ALG3	ENSG00000214160.5	chr3	-	183961578	183961784			183961341	183961418	183962388	183962509	-0.14100	0.00008	0.00489	excluded	K562	PRPF8
MXE	ALG3	ENSG00000214160.5	chr3	-	183961578	183961784	183962985	183963146	183961341	183961418	183963255	183963403	-0.15700	0.00012	0.00951	2included	K562	SAFB
MXE	ALG3	ENSG00000214160.5	chr3	-	183962388	183962509	183962985	183963146	183961341	183961418	183963255	183963403	-0.07600	0.00032	0.06097	2included	K562	SDAD1
MXE	ALG3	ENSG00000214160.5	chr3	-	183962388	183962509	183962985	183963146	183961341	183961418	183963255	183963403	-0.05500	0.00040	0.01613	2included	K562	EFTUD2
MXE	ALG3	ENSG00000214160.5	chr3	-	183962388	183962509	183962985	183963146	183961341	183961418	183963255	183963403	-0.06900	0.00049	0.02846	2included	K562	SAFB
SE	ALG3	ENSG00000214160.5	chr3	-	183961578	183961667			183961341	183961418	183962388	183962509	0.05100	0.00060	0.06293	included	HepG2	LARP4
SE	ALG3	ENSG00000214160.5	chr3	-	183961578	183961784			183961341	183961418	183962388	183962509	-0.11700	0.00115	0.05669	excluded	K562	EFTUD2
MXE	ALG3	ENSG00000214160.5	chr3	-	183962388	183962439	183962985	183963146	183961341	183961418	183963255	183963403	-0.06400	0.00176	0.06412	2included	K562	SAFB

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ALG3

General Information

Functions

Localization

Domains (AlphaFold: ALG3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ALG3 is not avaliable on ENCORE database.

14 proteins are bound to ALG3 RNA:

eCLIP assay for ALG3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ALG3 is not available on ENCORE database.

92 RBPs can affect the gene expression of ALG3 :

The Knockdown/knockout RNA-Seq assay for ALG3 is not available on ENCORE database.

10 RBPs can affect the splicing of ALG3 :

The Knockdown/knockout RNA-Seq assay for ALG3 is not avaliable on ENCORE database.