ACTL6A

General Information

Gene Name : ACTL6A
Gene ID : ENSG00000136518.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACTL6A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACTL6A	ENSG00000136518.16	88.20	74.05	81.12	ENCSR000AEF
HepG2	ACTL6A	ENSG00000136518.16	64.48	85.38	74.93	ENCSR985KAT
K562	ACTL6A	ENSG00000136518.16	134.42	119.78	127.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACTL6A is not avaliable on ENCORE database.

Proteins bound to RNA

ACTL6A RNA is bound by 11 proteins.

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eCLIP assay for ACTL6A is not avaliable on ENCORE database.

11 proteins are bound to ACTL6A RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	179280748	179280904	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.54019	17.87959	K562	DDX3X
chr3	179294032	179294095	+	3'-UTR,CDS	4.73727	13.66569	K562	LIN28B
chr3	179292120	179292189	+	CDS,intron-Proximal	5.02731	9.56266	K562	AQR
chr3	179306013	179306100	+	3'-UTR	3.32305	8.40205	K562	PABPC4
chr3	179298960	179299044	+	CDS,intron-Proximal	4.06217	6.89981	K562	EFTUD2
chr3	179306042	179306086	+	3'-UTR	3.36287	6.79091	K562	PUM2
chr3	179303900	179304107	+	intron-Distal	3.17888	5.40698	K562	KHSRP
chr3	179290990	179291131	+	intron-Distal,intron-Proximal	3.22315	4.76345	K562	KHSRP
chr3	179294605	179294686	+	3'-UTR,CDS,intron-Proximal	4.12351	4.60638	K562	GRWD1
chr3	179294611	179294700	+	3'-UTR,CDS,intron-Proximal	3.55940	4.14618	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for ACTL6A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACTL6A is not available on ENCORE database.
99 RBPs can affect the levels of ACTL6A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACTL6A is not available on ENCORE database.

99 RBPs can affect the gene expression of ACTL6A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACTL6A	ENSG00000136518.12	489.12400	1227.92630	-1.32800	20.50610	18.93570	HepG2	GPKOW
ACTL6A	ENSG00000136518.12	510.08820	1142.14480	-1.16290	19.39050	17.79450	HepG2	TARDBP
ACTL6A	ENSG00000136518.12	516.56910	969.83830	-0.90880	15.48260	14.47120	HepG2	TIAL1
ACTL6A	ENSG00000136518.12	1719.72660	1088.77610	0.65940	14.79600	13.88800	HepG2	SRSF1
ACTL6A	ENSG00000136518.12	533.78870	885.79100	-0.73070	12.68240	11.65310	HepG2	SRSF9
ACTL6A	ENSG00000136518.12	558.52860	1083.22120	-0.95560	12.92090	11.55450	HepG2	CPSF6
ACTL6A	ENSG00000136518.12	562.42480	1102.86370	-0.97150	11.62390	10.39770	HepG2	SUPV3L1
ACTL6A	ENSG00000136518.12	622.38070	978.51180	-0.65280	11.06380	10.04860	HepG2	TRIM56
ACTL6A	ENSG00000136518.12	1022.39050	1484.13700	-0.53770	10.83090	9.59290	HepG2	SLBP
ACTL6A	ENSG00000136518.12	2042.26690	2828.99030	-0.47010	10.76550	9.46470	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 113 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACTL6A is not available on ENCORE database.

6 RBPs can affect the splicing of ACTL6A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ACTL6A	ENSG00000136518.12	chr3	+	179293190	179293292	179292157	179292255	179294004	179294099	0.15000	0.00000	0.00000	included	HepG2	SF3B4
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280710	179280905	179280710	179280761	179287611	179287671	-0.15200	0.00000	0.00266	shorter	K562	TAF15
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280710	179280905	179280710	179280761	179287611	179287688	0.21500	0.00000	0.00010	longer	HepG2	FTO
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280710	179280905	179280710	179280761	179287611	179287688	0.17800	0.00020	0.01052	longer	HepG2	U2AF2
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280710	179280856	179280710	179280761	179287611	179287688	0.05700	0.00051	0.04530	longer	K562	SF3B4
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280717	179280856	179280717	179280761	179287611	179287671	0.13700	0.00052	0.06437	longer	K562	SUPV3L1
A5SS	ACTL6A	ENSG00000136518.12	chr3	+	179280710	179280856	179280710	179280761	179287611	179287671	0.13600	0.00081	0.07559	longer	K562	EFTUD2

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACTL6A

General Information

Functions

Localization

Domains (AlphaFold: ACTL6A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACTL6A is not avaliable on ENCORE database.

11 proteins are bound to ACTL6A RNA:

eCLIP assay for ACTL6A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACTL6A is not available on ENCORE database.

99 RBPs can affect the gene expression of ACTL6A :

The Knockdown/knockout RNA-Seq assay for ACTL6A is not available on ENCORE database.

6 RBPs can affect the splicing of ACTL6A :

The Knockdown/knockout RNA-Seq assay for ACTL6A is not avaliable on ENCORE database.