XXbac-BPG32J3.20

General Information

Gene Name : XXbac-BPG32J3.20
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: XXbac-BPG32J3.20)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.

Proteins bound to RNA

XXbac-BPG32J3.20 RNA is bound by 22 proteins.

eCLIP assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.

22 proteins are bound to XXbac-BPG32J3.20 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	31656043	31656122	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47438	14.21790	K562	PRPF8
chr6	31657450	31657495	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28196	3.17814	K562	U2AF1
chr6	31661141	31661175	-	3'-UTR,CDS,intron-Distal	4.95350	8.66757	K562	DDX24
chr6	31657855	31657879	-	3'-UTR,CDS,intron-Distal	3.76150	4.96634	HepG2	PPIG
chr6	31655057	31655138	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.60133	17.79841	K562	PRPF8
chr6	31656019	31656047	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39869	3.86355	HepG2	PPIG
chr6	31655607	31655661	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36853	8.59814	K562	DDX24
chr6	31654803	31654911	-	3'-UTR,intron-Distal,intron-Proximal	4.19780	5.19325	HepG2	LARP4
chr6	31656528	31656582	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24323	8.70141	K562	PRPF8
chr6	31655231	31655330	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.96871	12.77088	HepG2	PRPF8
chr6	31660889	31660936	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.54941	7.36655	K562	AQR
chr6	31655616	31655653	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87262	5.14848	K562	ZNF622
chr6	31656534	31656620	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.72890	21.23371	K562	AQR
chr6	31655508	31655581	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.11512	13.94612	K562	EFTUD2
chr6	31654843	31654924	-	3'-UTR,intron-Distal,intron-Proximal	3.72337	13.23717	K562	PUM2
chr6	31655513	31655574	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87753	6.86590	K562	SF3B4
chr6	31655606	31655673	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.43409	5.76403	K562	UCHL5
chr6	31657879	31657902	-	3'-UTR,CDS,intron-Distal	3.67653	4.24993	HepG2	PPIG
chr6	31661147	31661217	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22149	7.24530	K562	BUD13
chr6	31658312	31658364	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.61669	15.63075	K562	DDX24
chr6	31654811	31654923	-	3'-UTR,intron-Distal,intron-Proximal	6.69665	39.85811	HepG2	SUB1
chr6	31654999	31655068	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.16445	3.45275	HepG2	LARP4
chr6	31654765	31654800	-	3'-UTR,intron-Distal,intron-Proximal	3.82622	7.71026	K562	PABPC4
chr6	31661135	31661188	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62904	8.81096	HepG2	PPIG
chr6	31658273	31658339	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54494	9.28995	HepG2	PRPF8
chr6	31656510	31656570	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.09727	11.19852	K562	DDX24
chr6	31656538	31656607	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.73549	5.44908	K562	SF3B4
chr6	31656514	31656562	-	3'-UTR,CDS,intron-Distal	5.10089	7.35950	HepG2	PPIG
chr6	31657450	31657494	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11360	3.93753	K562	U2AF2
chr6	31657471	31657549	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.72120	4.32536	HepG2	SF3B4
chr6	31655440	31655508	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.76154	7.63242	K562	EFTUD2
chr6	31656430	31656521	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.72346	14.14355	K562	PRPF8
chr6	31657452	31657529	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.83072	41.42396	K562	SF3B4
chr6	31664771	31664831	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.38279	11.19864	K562	AQR
chr6	31656789	31656857	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.00606	9.24553	HepG2	PPIG
chr6	31655613	31655676	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.55966	8.68543	HepG2	PPIG
chr6	31656049	31656105	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02814	5.24578	K562	BUD13
chr6	31657461	31657536	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.86482	12.59652	K562	SMNDC1
chr6	31658315	31658361	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99147	10.98900	HepG2	PPIG
chr6	31657877	31657905	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.13948	11.49462	K562	DDX24
chr6	31660795	31660820	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37220	3.75245	K562	BUD13
chr6	31656508	31656592	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04797	10.99840	K562	BUD13
chr6	31656455	31656515	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.32846	9.00124	HepG2	PRPF8
chr6	31656048	31656112	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.42256	3.81059	HepG2	AQR
chr6	31657278	31657374	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85015	11.72792	HepG2	PRPF8
chr6	31659583	31659644	-	3'-UTR,CDS,intron-Distal	3.46425	5.58370	HepG2	PPIG
chr6	31656792	31656869	-	3'-UTR,CDS,intron-Distal	4.23321	7.34123	K562	DDX24
chr6	31656746	31656804	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37959	8.70001	HepG2	PRPF8
chr6	31655984	31656029	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.74566	10.19970	K562	PRPF8
chr6	31654802	31654927	-	3'-UTR,intron-Distal,intron-Proximal	5.74176	13.77375	K562	NOLC1
chr6	31659355	31659405	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22345	5.52342	HepG2	PPIG
chr6	31655993	31656034	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.95353	13.18785	K562	AQR
chr6	31656476	31656602	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.95876	7.09786	HepG2	AQR
chr6	31656042	31656114	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.55262	26.03057	K562	AQR
chr6	31655058	31655150	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67630	7.14119	HepG2	AQR
chr6	31659363	31659402	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22058	3.17151	K562	UCHL5
chr6	31657851	31657877	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.89296	5.64870	K562	DDX24
chr6	31655045	31655106	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.84587	21.22383	K562	AQR
chr6	31669849	31669909	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.91672	10.63554	K562	DDX3X
chr6	31668718	31668763	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.01552	4.66686	K562	DDX24
chr6	31668718	31668756	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.17653	4.51003	HepG2	PPIG
chr6	31668685	31668730	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.73026	5.65303	HepG2	PRPF8
chr6	31659714	31659760	-	intron-Distal,intron-Proximal	5.00150	8.69408	K562	SF3B4
chr6	31668676	31668702	-	intron-Distal,intron-Proximal	5.15846	10.64121	K562	AQR
chr6	31657723	31657774	-	intron-Distal,intron-Proximal	4.02797	6.39986	K562	SF3B4
chr6	31656785	31656792	-	intron-Distal,intron-Proximal	4.74336	9.40826	K562	AQR
chr6	31656458	31656462	-	intron-Distal,intron-Proximal	6.32264	33.68753	K562	AQR
chr6	31655213	31655253	-	intron-Distal,intron-Proximal	5.45181	10.44662	K562	PRPF8
chr6	31657931	31657981	-	intron-Distal,intron-Proximal	6.00807	8.42776	K562	SF3B4
chr6	31670946	31671013	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.85943	25.97273	K562	DDX3X
chr6	31655106	31655138	-	intron-Distal,intron-Proximal	4.36955	14.30285	K562	AQR
chr6	31670924	31670981	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.23925	5.73530	K562	DDX24
chr6	31660457	31660525	-	intron-Distal,intron-Proximal	3.07638	4.14649	K562	GTF2F1
chr6	31656495	31656500	-	intron-Distal,intron-Proximal	5.32714	30.82809	K562	AQR
chr6	31655212	31655274	-	intron-Distal,intron-Proximal	5.29058	15.78978	K562	AQR
chr6	31656482	31656495	-	intron-Distal,intron-Proximal	5.71548	31.38880	K562	AQR
chr6	31668702	31668718	-	intron-Distal,intron-Proximal	6.05881	10.04245	K562	AQR
chr6	31664858	31664915	-	intron-Distal,intron-Proximal	3.55083	10.33796	K562	PTBP1
chr6	31655097	31655142	-	intron-Distal,intron-Proximal	4.95528	5.27173	HepG2	PRPF8
chr6	31670926	31670939	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.91829	7.63469	K562	DDX3X
chr6	31670929	31671006	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.29764	4.16554	HepG2	PPIG
chr6	31656749	31656775	-	intron-Distal,intron-Proximal	6.48456	14.50093	K562	AQR
chr6	31659342	31659356	-	intron-Distal,intron-Proximal	3.27563	3.49168	K562	AQR
chr6	31656720	31656790	-	intron-Distal,intron-Proximal	4.93695	11.51106	K562	PRPF8
chr6	31657654	31657755	-	intron-Distal	4.44186	9.96882	K562	SMNDC1
chr6	31661094	31661129	-	intron-Distal,intron-Proximal	4.61607	6.48405	K562	AQR
chr6	31658054	31658182	-	intron-Distal,intron-Proximal	3.31904	4.05663	K562	HNRNPL
chr6	31660450	31660515	-	intron-Distal,intron-Proximal	3.54218	5.66421	K562	PRPF8
chr6	31671013	31671093	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.72244	23.55985	K562	DDX3X
chr6	31661228	31661255	-	intron-Distal,intron-Proximal	4.96250	3.91589	K562	SF3B4
chr6	31670656	31670728	-	5'-UTR,intron-Distal	3.60956	3.30744	K562	PTBP1
chr6	31671016	31671096	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.49546	18.21641	HepG2	DDX3X
chr6	31656775	31656785	-	intron-Distal,intron-Proximal	6.24548	11.65826	K562	AQR
chr6	31670897	31670922	-	intron-Distal,intron-Proximal	4.99211	5.69951	K562	AQR
chr6	31656660	31656707	-	intron-Distal,intron-Proximal	5.12067	6.08021	K562	PRPF8
chr6	31664810	31664863	-	intron-Distal,intron-Proximal	4.25226	9.71879	K562	SF3B4
chr6	31656462	31656482	-	intron-Distal,intron-Proximal	5.82106	35.15786	K562	AQR
chr6	31670978	31671110	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.17755	8.33105	HepG2	NCBP2
chr6	31664705	31664725	-	intron-Distal,intron-Proximal	3.95984	7.58883	K562	AQR
chr6	31670921	31671089	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.96758	5.85226	K562	UCHL5
chr6	31664685	31664705	-	intron-Distal,intron-Proximal	4.91108	8.69247	K562	AQR
chr6	31659305	31659342	-	intron-Distal,intron-Proximal	3.80392	6.32052	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for XXbac-BPG32J3.20 is not available on ENCORE database.
No RBPs affect the gene expression of XXbac-BPG32J3.20 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for XXbac-BPG32J3.20 is not available on ENCORE database.

No RBPs affect the gene expression of XXbac-BPG32J3.20 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for XXbac-BPG32J3.20 is not available on ENCORE database.

8 RBPs can affect the splicing of XXbac-BPG32J3.20 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31659355	31659457			31658315	31658379	31659580	31659695	-0.09300	0.00081	0.01750	excluded	K562	SRSF1
SE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31659580	31659695			31659355	31659457	31660803	31660926	-0.26100	0.00001	0.00027	excluded	HepG2	U2AF2
SE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31669050	31669117			31668718	31668805	31669850	31669907	-0.09400	0.00650	0.08835	excluded	K562	U2AF2
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31661135	31661298			31661135	31661209	31664724	31664846	0.08900	0.00000	0.00001	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31656025	31656183			31656025	31656082	31656499	31656604	0.08500	0.00000	0.00000	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31658315	31658465			31658315	31658379	31659355	31659457	0.11100	0.00000	0.00000	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31656791	31656940			31656791	31656896	31657357	31657481	0.06400	0.00006	0.00053	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31656499	31656674			31656499	31656563	31656791	31656927	0.13200	0.00000	0.00000	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31655817	31655911			31655817	31655880	31656025	31656082	0.12100	0.00000	0.00000	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31664724	31664862			31664724	31664810	31668718	31668805	0.06600	0.00000	0.00002	longer	K562	AQR
A3SS	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31660803	31661046			31660803	31660926	31661135	31661238	0.08600	0.00000	0.00000	longer	K562	AQR
RI	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31655274	31655504			31655274	31655321	31655418	31655504	0.12800	0.00000	0.00000	included	K562	AQR
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31657854	31657904	31659355	31659457	31657357	31657481	31659580	31659695	0.14400	0.00174	0.05123	1included	K562	PTBP1
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31658315	31658379	31659355	31659457	31657854	31657904	31659580	31659695	0.17400	0.00105	0.03477	1included	K562	XRN2
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31658315	31658379	31659355	31659457	31657357	31657481	31659580	31659695	-0.13500	0.00139	0.02446	2included	K562	SRSF1
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31657854	31657904	31658315	31658379	31657357	31657481	31659355	31659457	0.21300	0.00010	0.00934	1included	HepG2	BCCIP
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31657854	31657904	31658315	31658379	31657357	31657481	31659355	31659457	0.27600	0.00015	0.00555	1included	HepG2	DDX55
MXE	XXbac-BPG32J3.20	ENSG00000204422.7	chr6	-	31657854	31657904	31658315	31658379	31657357	31657481	31659355	31659457	0.20200	0.00024	0.01189	1included	HepG2	SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

XXbac-BPG32J3.20

General Information

Functions

Localization

Domains (AlphaFold: XXbac-BPG32J3.20)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.

22 proteins are bound to XXbac-BPG32J3.20 RNA:

eCLIP assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for XXbac-BPG32J3.20 is not available on ENCORE database.

No RBPs affect the gene expression of XXbac-BPG32J3.20 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for XXbac-BPG32J3.20 is not available on ENCORE database.

8 RBPs can affect the splicing of XXbac-BPG32J3.20 :

The Knockdown/knockout RNA-Seq assay for XXbac-BPG32J3.20 is not avaliable on ENCORE database.