RP5-977B1.7

General Information

Gene Name : RP5-977B1.7
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP5-977B1.7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP5-977B1.7 is not avaliable on ENCORE database.

Proteins bound to RNA

RP5-977B1.7 RNA is bound by 21 proteins.

eCLIP assay for RP5-977B1.7 is not avaliable on ENCORE database.

21 proteins are bound to RP5-977B1.7 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	35178236	35178306	-	intron-Distal	4.12230	11.74221	HepG2	CSTF2T
chr20	35192556	35192616	-	intron-Distal	3.43173	3.84798	HepG2	MATR3
chr20	35169600	35169681	-	intron-Distal	3.55322	8.25284	HepG2	NKRF
chr20	35192536	35192585	-	intron-Distal	3.05803	3.00129	HepG2	SUGP2
chr20	35166048	35166097	-	intron-Distal	4.92488	5.08739	K562	XRCC6
chr20	35168994	35169051	-	intron-Distal	3.35971	6.12336	HepG2	CSTF2T
chr20	35169875	35169978	-	intron-Distal	5.85971	15.63248	HepG2	CSTF2T
chr20	35179431	35179536	-	intron-Distal	4.43234	7.66367	HepG2	SFPQ
chr20	35169748	35169852	-	intron-Distal	4.68515	6.56790	HepG2	FAM120A
chr20	35191322	35191437	-	intron-Distal	3.04574	3.00437	HepG2	HNRNPK
chr20	35158419	35158465	-	intron-Distal	3.04031	3.00221	HepG2	CSTF2T
chr20	35198080	35198123	-	intron-Distal	5.08206	6.96728	HepG2	HNRNPM
chr20	35179442	35179503	-	intron-Distal	3.18832	3.23179	HepG2	RBFOX2
chr20	35156813	35156880	-	intron-Distal	4.07181	6.73995	HepG2	CSTF2T
chr20	35169262	35169312	-	intron-Distal	4.83864	5.15564	HepG2	FAM120A
chr20	35192550	35192698	-	intron-Distal	4.63351	3.30687	K562	EXOSC5
chr20	35178641	35178692	-	intron-Distal	3.27037	6.05986	HepG2	CSTF2T
chr20	35169299	35169331	-	intron-Distal	3.50662	4.14880	HepG2	CSTF2T
chr20	35179184	35179233	-	intron-Distal	4.21599	3.56121	HepG2	FASTKD2
chr20	35177419	35177472	-	intron-Distal,intron-Proximal	4.92911	7.09999	HepG2	CSTF2T
chr20	35142348	35142420	-	intron-Distal	4.09159	4.10336	HepG2	SUGP2
chr20	35193401	35193492	-	intron-Distal	4.35985	4.86210	HepG2	HNRNPM
chr20	35169439	35169515	-	intron-Distal	4.05167	17.39213	HepG2	CSTF2T
chr20	35166048	35166109	-	intron-Distal	3.00758	4.76325	HepG2	HNRNPC
chr20	35192630	35192712	-	intron-Distal	6.10002	8.05797	HepG2	HNRNPM
chr20	35177610	35177676	-	intron-Distal	3.45537	3.94360	HepG2	GTF2F1
chr20	35169156	35169248	-	intron-Distal	4.31773	5.44474	HepG2	FAM120A
chr20	35176575	35176658	-	intron-Distal	4.66553	8.74824	HepG2	RBFOX2
chr20	35157176	35157220	-	intron-Distal	3.67859	5.86001	HepG2	CSTF2T
chr20	35142352	35142464	-	intron-Distal	3.77552	4.19039	HepG2	PTBP1
chr20	35156779	35156813	-	intron-Distal	3.13161	3.23466	HepG2	CSTF2T
chr20	35169802	35169848	-	intron-Distal	4.38323	8.40143	HepG2	CSTF2T
chr20	35169444	35169498	-	intron-Distal	3.25324	5.15026	HepG2	NKRF
chr20	35192583	35192746	-	intron-Distal	6.06864	22.88297	HepG2	EXOSC5
chr20	35169590	35169682	-	intron-Distal	3.86771	11.41717	HepG2	CSTF2T
chr20	35142464	35142525	-	intron-Distal	3.44765	3.89405	HepG2	PTBP1
chr20	35174889	35174949	-	intron-Distal	3.04031	3.00221	HepG2	CSTF2T
chr20	35170539	35170600	-	intron-Distal	3.61760	7.70097	HepG2	CSTF2T
chr20	35178240	35178297	-	intron-Distal	3.94498	3.05512	HepG2	PRPF4
chr20	35192582	35192630	-	intron-Distal	3.67645	3.53619	HepG2	HNRNPM
chr20	35170000	35170156	-	intron-Distal	4.55041	5.87141	HepG2	HNRNPK
chr20	35158685	35158809	-	intron-Distal	4.88861	4.66110	HepG2	SFPQ
chr20	35177630	35177686	-	intron-Distal	4.27101	4.10323	HepG2	PRPF4
chr20	35178968	35179003	-	intron-Distal	3.71263	5.32871	HepG2	CSTF2T
chr20	35177809	35177889	-	intron-Distal	3.23810	5.44187	HepG2	CSTF2T
chr20	35177588	35177684	-	intron-Distal	5.38961	6.37044	HepG2	NKRF
chr20	35158809	35158863	-	intron-Distal	4.53500	3.00241	HepG2	SFPQ
chr20	35169450	35169519	-	intron-Distal	4.27649	7.41671	HepG2	FAM120A
chr20	35176389	35176436	-	intron-Distal	3.74136	6.26465	HepG2	CSTF2T
chr20	35156093	35156195	-	intron-Distal,intron-Proximal	4.60208	7.20825	HepG2	CSTF2
chr20	35155932	35156039	-	intron-Distal,intron-Proximal	3.06063	4.46082	HepG2	CSTF2T
chr20	35191331	35191407	-	intron-Distal	4.00417	5.38389	HepG2	PCBP2
chr20	35158067	35158190	-	intron-Distal	3.01086	4.54829	HepG2	CSTF2T
chr20	35171032	35171090	-	intron-Distal	4.39095	3.92947	HepG2	DDX59
chr20	35173118	35173261	-	intron-Distal	4.69987	5.44892	HepG2	FAM120A
chr20	35170600	35170654	-	intron-Distal	3.87779	8.61847	HepG2	CSTF2T
chr20	35192625	35192705	-	intron-Distal	3.28311	5.21411	HepG2	BCCIP
chr20	35176578	35176646	-	intron-Distal	4.25344	7.72301	HepG2	CSTF2T
chr20	35169600	35169680	-	intron-Distal	3.02990	4.39704	HepG2	FAM120A
chr20	35178407	35178492	-	intron-Distal	4.01382	3.31570	HepG2	HNRNPK
chr20	35169386	35169439	-	intron-Distal	4.99184	5.60609	HepG2	CSTF2T
chr20	35178862	35178946	-	intron-Distal	4.24400	11.24360	HepG2	CSTF2T
chr20	35169170	35169226	-	intron-Distal	4.34321	9.67020	HepG2	CSTF2T
chr20	35173416	35173523	-	intron-Distal	3.52355	5.09665	HepG2	HNRNPK
chr20	35176758	35176814	-	intron-Distal	4.06631	6.48652	HepG2	CSTF2T
chr20	35177943	35178035	-	intron-Distal	3.06130	5.30839	HepG2	CSTF2T
chr20	35190385	35190468	-	intron-Distal	3.69156	3.24590	HepG2	ILF3
chr20	35170020	35170075	-	intron-Distal	3.04317	6.66905	HepG2	CSTF2T
chr20	35170278	35170376	-	intron-Distal	3.61673	3.53589	HepG2	DDX59
chr20	35171826	35171867	-	intron-Distal	3.13217	3.79911	HepG2	CSTF2T
chr20	35198130	35198206	-	intron-Distal	4.04015	6.98528	HepG2	HNRNPM
chr20	35170273	35170309	-	intron-Distal	3.43943	4.88713	HepG2	CSTF2T
chr20	35170100	35170158	-	intron-Distal	5.14966	9.35257	HepG2	CSTF2T
chr20	35171926	35171947	-	intron-Distal	3.08091	3.24283	HepG2	NKRF
chr20	35177220	35177335	-	intron-Distal	3.80069	6.23254	HepG2	PRPF4
chr20	35171080	35171112	-	intron-Distal	3.65273	5.08839	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP5-977B1.7 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP5-977B1.7 is not available on ENCORE database.
3 RBPs can affect the levels of RP5-977B1.7.

The Knockdown/knockout RNA-Seq assay for RP5-977B1.7 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP5-977B1.7 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP5-977B1.7	ENSG00000232907.3	45.67790	19.19980	1.25030	2.06990	1.41320	HepG2	CNOT7
RP5-977B1.7	ENSG00000232907.3	6.47160	20.93730	-1.69390	2.10410	1.51500	HepG2	SF3A3
RP5-977B1.7	ENSG00000232907.3	8.80760	31.48090	-1.83760	2.71270	2.24330	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP5-977B1.7

General Information

Functions

Localization

Domains (AlphaFold: RP5-977B1.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP5-977B1.7 is not avaliable on ENCORE database.

21 proteins are bound to RP5-977B1.7 RNA:

eCLIP assay for RP5-977B1.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP5-977B1.7 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP5-977B1.7 :

The Knockdown/knockout RNA-Seq assay for RP5-977B1.7 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP5-977B1.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP5-977B1.7 is not avaliable on ENCORE database.