RP4-610C12.4

General Information

Gene Name : RP4-610C12.4
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP4-610C12.4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP4-610C12.4 is not avaliable on ENCORE database.

Proteins bound to RNA

RP4-610C12.4 RNA is bound by 21 proteins.

eCLIP assay for RP4-610C12.4 is not avaliable on ENCORE database.

21 proteins are bound to RP4-610C12.4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	29519438	29519556	-	intron-Distal	4.09498	8.33000	K562	PHF6
chr20	29519512	29519533	-	intron-Distal	4.16460	8.46297	K562	YWHAG
chr20	29519433	29519530	-	intron-Distal	3.35770	22.81273	K562	TIA1
chr20	29519498	29519554	-	intron-Distal	3.97793	8.78792	K562	BUD13
chr20	29519436	29519535	-	intron-Distal	3.02551	11.05832	K562	DDX52
chr20	29521008	29521057	-	intron-Distal	5.41783	6.58769	K562	EIF4G2
chr20	29519476	29519495	-	intron-Distal	4.83278	63.68912	K562	EIF4G2
chr20	29519494	29519534	-	intron-Distal	5.49403	35.61489	K562	SLTM
chr20	29519437	29519476	-	intron-Distal	4.68716	54.12929	K562	EIF4G2
chr20	29521015	29521059	-	intron-Distal	5.44632	7.73335	K562	SMNDC1
chr20	29519435	29519505	-	intron-Distal	3.47248	12.08914	K562	DROSHA
chr20	29519434	29519493	-	intron-Distal	5.37193	40.83479	K562	YWHAG
chr20	29521019	29521062	-	intron-Distal	4.57717	9.80960	K562	NONO
chr20	29519435	29519497	-	intron-Distal	3.17810	13.60949	K562	CSTF2T
chr20	29519493	29519512	-	intron-Distal	4.49055	10.79117	K562	YWHAG
chr20	29519437	29519505	-	intron-Distal	4.10036	3.34442	K562	FUS
chr20	29519438	29519494	-	intron-Distal	5.79012	400.00000	K562	SLTM
chr20	29519435	29519498	-	intron-Distal	3.21044	5.36718	K562	IGF2BP2
chr20	29519495	29519535	-	intron-Distal	6.48233	33.57165	K562	EIF4G2
chr20	29519439	29519506	-	intron-Distal	4.14256	32.53061	K562	GEMIN5
chr20	29521020	29521060	-	intron-Distal	4.82427	5.94882	K562	YWHAG
chr20	29519434	29519513	-	intron-Distal	3.30376	14.85943	K562	DHX30
chr20	29519435	29519477	-	intron-Distal	5.10765	35.43761	K562	NONO
chr20	29521010	29521053	-	intron-Distal	4.14870	4.96047	K562	SLTM
chr20	29519435	29519499	-	intron-Distal	3.80145	4.90450	K562	TBRG4
chr20	29519433	29519491	-	intron-Distal	4.25994	15.21370	K562	SMNDC1
chr20	29519436	29519559	-	intron-Distal	3.30986	11.55716	K562	METAP2
chr20	29519436	29519506	-	intron-Distal	4.37016	24.12767	K562	EWSR1
chr20	29519495	29519555	-	intron-Distal	3.39583	3.43213	K562	UCHL5
chr20	29519477	29519496	-	intron-Distal	4.72020	26.60658	K562	NONO
chr20	29519435	29519525	-	intron-Distal	3.99332	13.32420	K562	PTBP1
chr20	29519437	29519538	-	intron-Distal	3.09222	7.27703	K562	SRSF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP4-610C12.4 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP4-610C12.4 is not available on ENCORE database.
4 RBPs can affect the levels of RP4-610C12.4.

The Knockdown/knockout RNA-Seq assay for RP4-610C12.4 is not available on ENCORE database.

4 RBPs can affect the gene expression of RP4-610C12.4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP4-610C12.4	ENSG00000205611.3	23.93560	3.84860	2.63670	3.10390	2.13400	K562	EFTUD2
RP4-610C12.4	ENSG00000205611.3	37.23390	10.32940	1.84980	2.96360	2.10240	K562	PCBP3
RP4-610C12.4	ENSG00000205611.3	28.29510	7.92470	1.83600	2.65500	1.87260	K562	POLR2G
RP4-610C12.4	ENSG00000205611.3	18.40390	4.97980	1.88580	1.95290	1.35180	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP4-610C12.4

General Information

Functions

Localization

Domains (AlphaFold: RP4-610C12.4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP4-610C12.4 is not avaliable on ENCORE database.

21 proteins are bound to RP4-610C12.4 RNA:

eCLIP assay for RP4-610C12.4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP4-610C12.4 is not available on ENCORE database.

4 RBPs can affect the gene expression of RP4-610C12.4 :

The Knockdown/knockout RNA-Seq assay for RP4-610C12.4 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP4-610C12.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-610C12.4 is not avaliable on ENCORE database.