RP11-648K4.2

General Information

Gene Name : RP11-648K4.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-648K4.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-648K4.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-648K4.2 RNA is bound by 16 proteins.

eCLIP assay for RP11-648K4.2 is not avaliable on ENCORE database.

16 proteins are bound to RP11-648K4.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	88165894	88165988	-	intron-Distal	4.80042	7.29443	K562	MATR3
chr15	88220440	88220460	-	intron-Distal	3.35760	7.01633	K562	KHSRP
chr15	87976344	87976400	-	intron-Distal	3.99685	6.46803	K562	UCHL5
chr15	88169718	88169874	-	intron-Distal	3.11162	3.20049	K562	HNRNPK
chr15	88220542	88220565	-	intron-Distal	5.31850	24.40816	K562	KHSRP
chr15	88131849	88131952	-	intron-Distal	4.75838	7.92673	K562	HNRNPL
chr15	87980183	87980239	-	intron-Distal	4.73212	5.39854	K562	PTBP1
chr15	88002639	88002731	-	intron-Distal	4.09929	3.54264	K562	SAFB2
chr15	88131761	88131814	-	intron-Distal	3.88390	3.14791	K562	HNRNPL
chr15	88150728	88150793	-	intron-Distal	3.70858	11.37649	K562	AGGF1
chr15	88153227	88153296	-	intron-Distal	3.60659	3.69083	K562	PTBP1
chr15	88234762	88234812	-	intron-Distal	3.10354	3.14580	K562	ILF3
chr15	88219318	88219410	-	intron-Distal	4.38506	4.75572	K562	MATR3
chr15	88165441	88165532	-	intron-Distal	4.69650	7.08067	K562	PTBP1
chr15	88152994	88153104	-	intron-Distal	4.13960	7.80454	K562	PTBP1
chr15	88192334	88192398	-	intron-Distal	4.40993	5.18738	K562	TARDBP
chr15	88121619	88121697	-	intron-Distal	3.76220	3.08314	K562	TARDBP
chr15	88243159	88243264	-	intron-Distal	4.17623	6.99720	K562	MATR3
chr15	88242704	88242773	-	intron-Distal	3.96658	3.33062	K562	ILF3
chr15	88246924	88246965	-	intron-Distal	5.12711	5.43878	K562	TIA1
chr15	88239156	88239229	-	intron-Distal	4.40322	5.31905	K562	ILF3
chr15	88165470	88165536	-	intron-Distal	4.09389	3.90241	K562	MATR3
chr15	88201603	88201685	-	intron-Distal	3.63212	4.84851	K562	ILF3
chr15	88224433	88224510	-	intron-Distal	3.68556	4.32448	K562	PTBP1
chr15	88243099	88243159	-	intron-Distal	3.60168	5.33544	K562	MATR3
chr15	88241171	88241244	-	intron-Distal	3.72350	4.31658	K562	EXOSC5
chr15	88168310	88168452	-	intron-Distal	3.16597	7.10749	K562	HNRNPL
chr15	88125980	88126081	-	intron-Distal	3.98171	3.62025	K562	MATR3
chr15	88243156	88243225	-	intron-Distal	3.89907	4.22415	K562	PTBP1
chr15	88219790	88219867	-	intron-Distal	3.82497	3.08314	K562	TARDBP
chr15	88213435	88213547	-	intron-Distal	3.69050	3.12651	K562	SAFB2
chr15	88025344	88025436	-	intron-Distal	3.82290	3.14791	K562	HNRNPL
chr15	88145899	88145994	-	intron-Distal	4.16299	3.62025	K562	MATR3
chr15	88236816	88236918	-	intron-Distal	3.92728	3.57928	K562	GTF2F1
chr15	88239608	88239691	-	intron-Distal	3.32781	3.59765	K562	ILF3
chr15	88176506	88176578	-	intron-Distal	3.12754	3.59765	K562	ILF3
chr15	88228988	88229104	-	intron-Distal	3.65744	3.45133	K562	HNRNPU
chr15	87975307	87975363	-	intron-Distal	5.26014	5.69951	K562	AQR
chr15	88227301	88227438	-	intron-Distal	4.83196	7.56720	K562	PTBP1
chr15	88220460	88220542	-	intron-Distal	4.00432	21.44346	K562	KHSRP
chr15	88165587	88165643	-	intron-Distal	6.08580	10.46904	K562	PTBP1
chr15	88158416	88158523	-	intron-Distal	3.99390	4.69074	K562	PTBP1
chr15	88165341	88165403	-	intron-Distal	3.93194	3.33944	K562	MATR3
chr15	88153150	88153227	-	intron-Distal	4.79140	11.65716	K562	PTBP1
chr15	88239261	88239336	-	intron-Distal	4.25906	3.81649	K562	ILF3
chr15	88165557	88165662	-	intron-Distal	5.05771	8.59780	K562	MATR3
chr15	88220401	88220440	-	intron-Distal	3.03532	7.02852	K562	KHSRP
chr15	87975416	87975486	-	intron-Distal	5.43792	4.91909	K562	FMR1
chr15	88201478	88201573	-	intron-Distal	4.58430	5.86170	K562	ILF3
chr15	88243738	88243771	-	intron-Distal	3.87848	3.06015	K562	MATR3
chr15	88193849	88193970	-	intron-Distal	4.07845	3.80299	K562	HNRNPL
chr15	88166535	88166678	-	intron-Distal	3.51738	6.67026	K562	KHSRP
chr15	88182868	88183005	-	intron-Distal	4.05178	3.92684	K562	KHSRP
chr15	88162117	88162199	-	intron-Distal	3.04238	3.20628	K562	HNRNPL
chr15	88131669	88131761	-	intron-Distal	3.86958	6.00711	K562	HNRNPL
chr15	88220566	88220614	-	intron-Distal	4.17374	8.86302	K562	KHSRP
chr15	88165331	88165368	-	intron-Distal	3.64856	3.30744	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-648K4.2 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP11-648K4.2 is not available on ENCORE database.
No RBPs affect the gene expression of RP11-648K4.2 on ENCORE database.

RP11-648K4.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-648K4.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-648K4.2 is not avaliable on ENCORE database.

16 proteins are bound to RP11-648K4.2 RNA:

eCLIP assay for RP11-648K4.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-648K4.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-648K4.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-648K4.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-648K4.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-648K4.2 is not avaliable on ENCORE database.