RP11-368M16.9

General Information

Gene Name       : RP11-368M16.9
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-368M16.9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-368M16.9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-368M16.9 RNA is bound by 19 proteins.  







eCLIP assay for RP11-368M16.9 is not avaliable on ENCORE database.





19 proteins are bound to RP11-368M16.9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr75771066157710713-intron-Distal4.198517.18598K562DROSHA
chr75771066157710738-intron-Distal3.568207.28739K562GEMIN5
chr75771066457710713-intron-Distal4.221093.87294K562TARDBP
chr75771066057710723-intron-Distal5.8515259.50313K562SLTM
chr75771065957710725-intron-Distal4.3174612.93870K562EWSR1
chr75771066557710720-intron-Distal5.9529740.03911K562YWHAG
chr75771066457710728-intron-Distal4.109699.34337K562DDX52
chr75771066157710719-intron-Distal3.5554110.41233K562SMNDC1
chr75771066557710719-intron-Distal4.0839114.57515K562NONO
chr75771066157710728-intron-Distal3.100676.04179K562MTPAP
chr75771066157710716-intron-Distal4.760904.86913K562XRN2
chr75771066157710721-intron-Distal3.522746.18734K562METAP2
chr75771066457710718-intron-Distal3.250923.46269K562XRCC6
chr75771066357710715-intron-Distal5.6299827.49692K562EIF4G2
chr75771065857710720-intron-Distal3.1581714.68685K562TIA1
chr75771066857710725-intron-Distal5.136515.34664K562TBRG4
chr75771066457710715-intron-Distal3.777095.83331K562SRSF1
chr75771066257710722-intron-Distal3.570406.24209K562AATF
chr75771066457710730-intron-Distal4.505918.03716K562PHF6
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-368M16.9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-368M16.9 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-368M16.9 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-368M16.9 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-368M16.9 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-368M16.9 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-368M16.9 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-368M16.9 is not avaliable on ENCORE database.