RP11-285F7.2

General Information

Gene Name : RP11-285F7.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-285F7.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-285F7.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-285F7.2 RNA is bound by 13 proteins.

eCLIP assay for RP11-285F7.2 is not avaliable on ENCORE database.

13 proteins are bound to RP11-285F7.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	226033904	226034004	-	3'-UTR,intron-Distal	6.20476	17.73863	HepG2	UPF1
chr1	226030523	226030560	-	intron-Distal	5.30475	8.03864	HepG2	EIF3H
chr1	226033534	226033600	-	3'-UTR,intron-Distal	4.86834	4.68979	HepG2	UPF1
chr1	226031626	226031730	-	intron-Distal	3.23285	5.80500	K562	HNRNPK
chr1	226034128	226034206	-	3'-UTR,intron-Distal,intron-Proximal	3.30608	3.41484	HepG2	LSM11
chr1	226034205	226034273	-	3'-UTR,intron-Distal,intron-Proximal	3.44595	4.44982	K562	UPF1
chr1	226034200	226034269	-	3'-UTR,intron-Distal,intron-Proximal	3.38650	5.77812	HepG2	EIF3H
chr1	226032992	226033074	-	intron-Distal	5.61326	11.61399	K562	GTF2F1
chr1	226031627	226031692	-	intron-Distal	4.71495	4.17937	HepG2	PCBP2
chr1	226033916	226034005	-	3'-UTR,intron-Distal	4.65314	9.77766	HepG2	AKAP1
chr1	226033776	226033889	-	3'-UTR,intron-Distal	3.53188	3.44847	HepG2	PABPN1
chr1	226032999	226033064	-	intron-Distal	4.17044	3.85108	HepG2	GTF2F1
chr1	226033868	226033915	-	3'-UTR,intron-Distal	3.20237	5.53028	K562	DGCR8
chr1	226034137	226034172	-	3'-UTR,intron-Distal	3.12347	4.36388	HepG2	EIF3H
chr1	226030168	226030275	-	intron-Distal	3.33060	3.22046	K562	AKAP8L
chr1	226032328	226032394	-	intron-Distal	3.31431	6.24036	HepG2	EIF3H
chr1	226034202	226034267	-	3'-UTR,intron-Distal,intron-Proximal	5.11191	7.79013	HepG2	AKAP1
chr1	226033762	226033789	-	3'-UTR,intron-Distal	3.25289	3.37083	K562	UPF1
chr1	226033414	226033498	-	3'-UTR,intron-Distal	4.15952	4.93514	HepG2	UPF1
chr1	226034032	226034093	-	3'-UTR,intron-Distal	4.01109	6.68355	HepG2	AKAP1
chr1	226034123	226034328	-	3'-UTR,intron-Distal,intron-Proximal	4.86419	22.37098	HepG2	UPF1
chr1	226033937	226034003	-	3'-UTR,intron-Distal	3.57893	5.35486	K562	UPF1
chr1	226033434	226033531	-	3'-UTR,intron-Distal	5.28204	7.53166	HepG2	AKAP1
chr1	226033538	226033585	-	3'-UTR,intron-Distal	3.74731	6.21520	HepG2	EIF3H
chr1	226031309	226031384	-	intron-Distal	3.76775	5.47379	HepG2	EIF3H
chr1	226030179	226030266	-	intron-Distal	4.58163	11.82575	HepG2	EIF3H
chr1	226033137	226033159	-	intron-Distal,intron-Proximal	4.40695	3.87930	K562	UPF1
chr1	226032984	226033055	-	intron-Distal	3.33221	6.09035	HepG2	HLTF
chr1	226033777	226033848	-	3'-UTR,intron-Distal	5.14497	7.98718	HepG2	UPF1
chr1	226034033	226034090	-	3'-UTR,intron-Distal	3.77871	5.64093	HepG2	UPF1
chr1	226034019	226034090	-	3'-UTR,intron-Distal	5.16242	6.50720	HepG2	LIN28B
chr1	226031873	226031967	-	intron-Distal	4.91574	7.70131	HepG2	PCBP2
chr1	226033780	226033799	-	3'-UTR,intron-Distal	4.04628	3.72123	HepG2	AKAP1
chr1	226034240	226034270	-	3'-UTR,intron-Distal,intron-Proximal	3.31007	3.44847	HepG2	PABPN1
chr1	226033974	226034019	-	3'-UTR,intron-Distal	4.04425	3.33617	HepG2	PABPN1
chr1	226030028	226030100	-	intron-Distal	4.30118	10.39724	HepG2	EIF3H
chr1	226033002	226033057	-	intron-Distal	5.07654	4.95154	K562	ZC3H11A
chr1	226034138	226034200	-	3'-UTR,intron-Distal,intron-Proximal	3.93332	6.42285	HepG2	AKAP1
chr1	226030428	226030474	-	intron-Distal	4.41595	7.59222	HepG2	EIF3H
chr1	226034010	226034096	-	3'-UTR,intron-Distal	4.40086	16.16162	K562	UPF1
chr1	226033762	226033834	-	3'-UTR,intron-Distal	4.12347	8.05048	HepG2	EIF3H
chr1	226032981	226033049	-	intron-Distal	4.98937	11.87249	HepG2	EIF3H
chr1	226033134	226033191	-	intron-Distal,intron-Proximal	4.20358	8.51579	HepG2	EIF3H
chr1	226034126	226034191	-	3'-UTR,intron-Distal,intron-Proximal	3.14169	5.45410	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-285F7.2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-285F7.2 is not available on ENCORE database.
2 RBPs can affect the levels of RP11-285F7.2.

The Knockdown/knockout RNA-Seq assay for RP11-285F7.2 is not available on ENCORE database.

2 RBPs can affect the gene expression of RP11-285F7.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-285F7.2	ENSG00000242861.1	3.02510	16.62790	-2.45850	2.23140	1.62000	HepG2	RBM25
RP11-285F7.2	ENSG00000242861.1	3.07400	18.38390	-2.58030	2.41660	1.96670	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-285F7.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-285F7.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-285F7.2 is not avaliable on ENCORE database.

13 proteins are bound to RP11-285F7.2 RNA:

eCLIP assay for RP11-285F7.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-285F7.2 is not available on ENCORE database.

2 RBPs can affect the gene expression of RP11-285F7.2 :

The Knockdown/knockout RNA-Seq assay for RP11-285F7.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-285F7.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-285F7.2 is not avaliable on ENCORE database.