RP11-10O17.1

General Information

Gene Name       : RP11-10O17.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-10O17.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-10O17.1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP11-10O17.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-10O17.1 is not avaliable on ENCORE database.






NO known proteins are bound to RP11-10O17.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-10O17.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-10O17.1 is not available on ENCORE database.

  • 18 RBPs can affect the levels of RP11-10O17.1.  








The Knockdown/knockout RNA-Seq assay for RP11-10O17.1 is not available on ENCORE database.





18 RBPs can affect the gene expression of RP11-10O17.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-10O17.1ENSG00000260103.20.000007.54810-99999.999992.222901.67880HepG2PUM1
RP11-10O17.1ENSG00000260103.268.9698024.850901.472604.405603.09890K562AKAP8
RP11-10O17.1ENSG00000260103.24.9637024.82800-2.322502.919002.02560K562BOP1
RP11-10O17.1ENSG00000260103.25.7772023.26950-2.010002.610401.90710K562EIF2S2
RP11-10O17.1ENSG00000260103.236.4123014.012001.377702.450301.67740K562EIF4A3
RP11-10O17.1ENSG00000260103.212.5230039.91770-1.672403.112902.11900K562EIF4G2
RP11-10O17.1ENSG00000260103.276.3682021.455901.831505.787404.95520K562HNRNPC
RP11-10O17.1ENSG00000260103.258.6735018.158601.692004.793903.68000K562MAGOH
RP11-10O17.1ENSG00000260103.215.6233036.80750-1.236302.028901.37840K562NSUN2
RP11-10O17.1ENSG00000260103.271.9108023.344801.623004.456903.79050K562PUS1
RP11-10O17.1ENSG00000260103.254.8527022.741701.270102.779902.18520K562RBM15
RP11-10O17.1ENSG00000260103.268.5761017.523401.968306.282304.78830K562RCC2
RP11-10O17.1ENSG00000260103.245.7960017.809301.362502.899001.77600K562NELFE
RP11-10O17.1ENSG00000260103.2129.8908044.312401.551404.545901.83050K562DROSHA
RP11-10O17.1ENSG00000260103.23.8130022.71220-2.574502.639601.84420K562RPS19
RP11-10O17.1ENSG00000260103.290.7519037.206801.286304.472503.31440K562SRPK2
RP11-10O17.1ENSG00000260103.2110.9404043.141401.362503.771601.98570K562SRSF9
RP11-10O17.1ENSG00000260103.24.9048039.02770-2.992206.315905.28240K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-10O17.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-10O17.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-10O17.1 is not avaliable on ENCORE database.