RP1-130H16.18

General Information

Gene Name       : RP1-130H16.18
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP1-130H16.18)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP1-130H16.18 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP1-130H16.18 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP1-130H16.18 is not avaliable on ENCORE database.






NO known proteins are bound to RP1-130H16.18 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP1-130H16.18 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP1-130H16.18 is not available on ENCORE database.

  • 15 RBPs can affect the levels of RP1-130H16.18.  








The Knockdown/knockout RNA-Seq assay for RP1-130H16.18 is not available on ENCORE database.





15 RBPs can affect the gene expression of RP1-130H16.18 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP1-130H16.18ENSG00000248751.217.892601.927203.214702.969902.15700HepG2ASCC1
RP1-130H16.18ENSG00000248751.211.441800.553104.370602.444501.80300HepG2DDX21
RP1-130H16.18ENSG00000248751.215.309902.229802.779402.101401.54820HepG2DDX3X
RP1-130H16.18ENSG00000248751.219.366501.003204.270904.265902.89450HepG2FUS
RP1-130H16.18ENSG00000248751.214.019201.879802.898702.030101.40300HepG2PABPC4
RP1-130H16.18ENSG00000248751.27.289100.0000099999.999901.923201.38750HepG2QKI
RP1-130H16.18ENSG00000248751.215.308800.0000099999.999904.209501.69940HepG2RPL23A
RP1-130H16.18ENSG00000248751.27.625200.0000099999.999902.060801.37050HepG2RPS3A
RP1-130H16.18ENSG00000248751.210.651700.946803.491802.283501.68940HepG2SAFB2
RP1-130H16.18ENSG00000248751.210.788800.0000099999.999903.580202.31350HepG2STIP1
RP1-130H16.18ENSG00000248751.210.711601.043003.360302.234501.71700HepG2TRIM56
RP1-130H16.18ENSG00000248751.29.219600.0000099999.999902.438501.45180K562CNOT7
RP1-130H16.18ENSG00000248751.20.0000017.96440-99999.999995.953304.84180K562GRSF1
RP1-130H16.18ENSG00000248751.20.0000017.02740-99999.999995.692103.40370K562RBM17
RP1-130H16.18ENSG00000248751.212.327700.0000099999.999903.820401.88380K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP1-130H16.18 is not available on ENCORE database.





1 RBPs can affect the splicing of RP1-130H16.18 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSRP1-130H16.18ENSG00000248751.2chr22-3068876130688906306887613068884030689639306897940.292000.002580.01616longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP1-130H16.18 is not avaliable on ENCORE database.