NUDT2

General Information

Gene Name       : NUDT2
Gene ID             : ENSG00000164978.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NUDT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NUDT2ENSG00000164978.1718.4220.4819.45ENCSR000AEF
HepG2NUDT2ENSG00000164978.1716.2416.1016.17ENCSR985KAT
K562NUDT2ENSG00000164978.1710.4312.4111.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NUDT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NUDT2 RNA is bound by 1 proteins.  







eCLIP assay for NUDT2 is not avaliable on ENCORE database.





1 proteins are bound to NUDT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93432957334329714+5'-UTR,intron-Distal,intron-Proximal4.114143.49003K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NUDT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NUDT2 is not available on ENCORE database.

  • 43 RBPs can affect the levels of NUDT2.  








The Knockdown/knockout RNA-Seq assay for NUDT2 is not available on ENCORE database.





43 RBPs can affect the gene expression of NUDT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NUDT2ENSG00000164978.13112.37390177.74710-0.661503.132902.32280HepG2AKAP8L
NUDT2ENSG00000164978.13127.52470176.87950-0.472001.916001.34830HepG2CKAP4
NUDT2ENSG00000164978.13128.54330254.82850-0.987304.704203.82150HepG2EIF4B
NUDT2ENSG00000164978.13163.34780255.45840-0.645103.312302.41170HepG2EIF4G1
NUDT2ENSG00000164978.1361.77500127.69830-1.047603.819002.51100HepG2FUS
NUDT2ENSG00000164978.13106.93560244.97680-1.195907.756806.67310HepG2G3BP1
NUDT2ENSG00000164978.1374.38440145.90740-0.972003.757102.31940HepG2HSPD1
NUDT2ENSG00000164978.13167.19310249.02370-0.574802.403901.76980HepG2IGF2BP2
NUDT2ENSG00000164978.13162.88300250.45630-0.620702.358201.44370HepG2KHSRP
NUDT2ENSG00000164978.13104.13730161.72180-0.635002.850301.82020HepG2KIF1C
NUDT2ENSG00000164978.13106.31610264.14530-1.313009.381708.18920HepG2MAGOH
NUDT2ENSG00000164978.13150.61470265.63250-0.818604.026903.27800HepG2MATR3
NUDT2ENSG00000164978.13187.68770271.89680-0.534702.188801.62340HepG2NCBP2
NUDT2ENSG00000164978.1354.31890143.07570-1.397305.030603.53110HepG2NONO
NUDT2ENSG00000164978.13150.75570242.17490-0.683803.216902.44030HepG2PABPC4
NUDT2ENSG00000164978.1366.97880120.21770-0.843902.475901.71010HepG2PRPF8
NUDT2ENSG00000164978.13152.98930275.23000-0.847206.010905.26740HepG2PTBP1
NUDT2ENSG00000164978.13114.64710245.07040-1.096007.093706.19540HepG2PUF60
NUDT2ENSG00000164978.13182.97540298.03680-0.703804.260703.50990HepG2QKI
NUDT2ENSG00000164978.13144.31720270.50420-0.906405.889804.93880HepG2RBM25
NUDT2ENSG00000164978.13194.07700306.28740-0.658303.983103.35590HepG2NELFE
NUDT2ENSG00000164978.13166.31810285.29630-0.778505.163804.35600HepG2RECQL
NUDT2ENSG00000164978.13165.15840286.51290-0.794705.277904.50650HepG2SF3B4
NUDT2ENSG00000164978.13223.88650299.07260-0.417701.942501.52640HepG2SRSF1
NUDT2ENSG00000164978.13124.73700241.99630-0.956106.387505.49010HepG2SRSF5
NUDT2ENSG00000164978.13126.87990243.32450-0.939406.927106.12530HepG2SRSF9
NUDT2ENSG00000164978.1393.49260155.12370-0.730502.171301.56190HepG2SUPV3L1
NUDT2ENSG00000164978.13167.43850247.00120-0.560902.709101.88050HepG2TIA1
NUDT2ENSG00000164978.1375.59350127.48310-0.754002.695002.19970HepG2TIAL1
NUDT2ENSG00000164978.1375.47060121.93400-0.692102.442301.80510HepG2ZC3H8
NUDT2ENSG00000164978.13235.20440157.475200.578702.760802.19300K562AGGF1
NUDT2ENSG00000164978.13192.01270285.49970-0.572302.479101.91750K562AQR
NUDT2ENSG00000164978.13190.58740129.503800.557402.507201.88270K562DDX47
NUDT2ENSG00000164978.13149.3066096.395600.631102.274301.50500K562FIP1L1
NUDT2ENSG00000164978.13206.59180118.155500.806002.510201.36530K562HNRNPA2B1
NUDT2ENSG00000164978.13201.45090117.054800.783104.111302.79630K562HNRNPL
NUDT2ENSG00000164978.13128.3778079.293200.695002.147001.33280K562HNRNPM
NUDT2ENSG00000164978.13195.85690130.682900.583602.259701.53660K562HSPD1
NUDT2ENSG00000164978.13115.28720204.70610-0.828304.824703.56950K562MATR3
NUDT2ENSG00000164978.13277.85920194.816700.512102.328101.50620K562MBNL1
NUDT2ENSG00000164978.13189.04220103.376900.870702.630501.67110K562PABPN1
NUDT2ENSG00000164978.13184.76880109.437400.755503.517002.57310K562PPIG
NUDT2ENSG00000164978.1388.65970144.97640-0.709502.140501.47750K562PRPF8
NUDT2ENSG00000164978.13292.71070162.528100.848704.901104.20440K562PUS1
NUDT2ENSG00000164978.13233.75690158.336200.561902.576302.00080K562RBM15
NUDT2ENSG00000164978.13178.2520094.554900.914602.531001.40130K562SF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NUDT2 is not available on ENCORE database.





8 RBPs can affect the splicing of NUDT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENUDT2ENSG00000164978.13chr9+3433622634336339343295033432959734338710343388450.324000.000040.00740includedHepG2G3BP1
SENUDT2ENSG00000164978.13chr9+3433622634336339343295033432959734338710343388450.159000.001910.03524includedK562SF3B4
SENUDT2ENSG00000164978.13chr9+3433622634336339343295033432959734338710343388450.106000.012630.09762includedK562AQR
SENUDT2ENSG00000164978.13chr9+343362263433633934329503343295973433871034338845-0.209000.000070.00184excludedK562PUS1
SENUDT2ENSG00000164978.13chr9+3433622634336339343295033432959734338710343388450.215000.000960.07286includedHepG2DDX6
SENUDT2ENSG00000164978.13chr9+3433622634336339343295033432959734338710343388450.283000.000240.00975includedHepG2SF3A3
SENUDT2ENSG00000164978.13chr9+343362263433633934329503343295973433871034338845-0.199000.000510.01634excludedK562AGGF1
MXENUDT2ENSG00000164978.13chr9+34336226343363393433871034338845343295033432959734339021343391640.114000.000260.046081includedK562MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NUDT2 is not avaliable on ENCORE database.