DTX2P1-UPK3BP1-PMS2P11

General Information

Gene Name : DTX2P1-UPK3BP1-PMS2P11
Gene ID : ENSG00000265479.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DTX2P1-UPK3BP1-PMS2P11)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.6	1.66	3.08	2.37	ENCSR000AEF
HepG2	DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.6	1.61	1.24	1.43	ENCSR985KAT
K562	DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.6	2.74	2.24	2.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.

Proteins bound to RNA

DTX2P1-UPK3BP1-PMS2P11 RNA is bound by 14 proteins.

eCLIP assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.

14 proteins are bound to DTX2P1-UPK3BP1-PMS2P11 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	76626722	76626899	+	intron-Distal	7.37499	27.43779	K562	EIF4G2
chr7	76626745	76626925	+	intron-Distal	5.65687	5.54520	K562	GTF2F1
chr7	76626896	76626943	+	intron-Distal	4.63538	4.92128	HepG2	CSTF2T
chr7	76626819	76626896	+	intron-Distal	5.47754	9.23970	HepG2	CSTF2T
chr7	76626751	76626898	+	intron-Distal	6.78610	25.89585	HepG2	FAM120A
chr7	76627119	76627246	+	intron-Distal	6.66825	12.95876	K562	EIF4G2
chr7	76626820	76626897	+	intron-Distal	5.08635	5.48218	K562	FAM120A
chr7	76628222	76628283	+	intron-Distal	5.61056	10.93035	K562	CSTF2T
chr7	76628528	76628572	+	intron-Distal	4.77221	4.19739	K562	EIF4G2
chr7	76628212	76628286	+	intron-Distal	6.02234	11.47680	K562	EIF4G2
chr7	76628204	76628280	+	intron-Distal	5.12168	3.77360	K562	GTF2F1
chr7	76628216	76628285	+	intron-Distal	5.77286	9.90383	K562	AKAP8L
chr7	76626831	76626943	+	intron-Distal	4.53773	5.09622	HepG2	IGF2BP1
chr7	76626726	76626911	+	intron-Distal	4.42912	5.23978	HepG2	PRPF4
chr7	76623203	76623297	+	intron-Distal	3.24400	3.67595	K562	EWSR1
chr7	76626898	76626939	+	intron-Distal	5.03447	7.81647	HepG2	FAM120A
chr7	76628522	76628577	+	intron-Distal	5.17504	9.49287	HepG2	CSTF2T
chr7	76627064	76627150	+	intron-Distal	5.53086	10.61528	HepG2	FAM120A
chr7	76626816	76626934	+	intron-Distal	5.78656	15.82330	K562	CSTF2T
chr7	76627052	76627119	+	intron-Distal	5.86473	7.07160	K562	EIF4G2
chr7	76621258	76621316	+	intron-Distal	4.53514	4.65580	K562	GTF2F1
chr7	76628177	76628289	+	intron-Distal	3.94141	3.52163	HepG2	IGF2BP1
chr7	76627150	76627194	+	intron-Distal	5.07147	7.81647	HepG2	FAM120A
chr7	76628597	76628684	+	intron-Distal	4.56991	5.28165	K562	CSTF2T
chr7	76626886	76626930	+	intron-Distal	5.22558	4.88145	K562	FASTKD2
chr7	76628600	76628677	+	intron-Distal	5.15225	7.71000	K562	FAM120A
chr7	76627161	76627278	+	intron-Distal	5.48800	12.78265	K562	CSTF2T
chr7	76628190	76628276	+	intron-Distal	5.35441	8.46281	HepG2	CSTF2T
chr7	76621254	76621313	+	intron-Distal	4.75097	7.00800	K562	CSTF2T
chr7	76623743	76623789	+	intron-Distal	3.86932	3.14687	K562	CSTF2T
chr7	76627234	76627279	+	intron-Distal	4.80344	6.62861	HepG2	FAM120A
chr7	76626739	76626816	+	intron-Distal	5.04329	9.14519	K562	CSTF2T
chr7	76628197	76628278	+	intron-Distal	5.22731	6.70265	K562	EWSR1
chr7	76626815	76626880	+	intron-Distal	3.42692	3.80752	K562	AKAP8L
chr7	76628312	76628345	+	intron-Distal	5.61439	5.67376	K562	FASTKD2
chr7	76628602	76628653	+	intron-Distal	3.10331	3.23466	HepG2	CSTF2T
chr7	76627060	76627122	+	intron-Distal	4.65372	4.42197	K562	EWSR1
chr7	76627652	76627710	+	intron-Distal	5.14921	8.38279	HepG2	FAM120A
chr7	76623232	76623303	+	intron-Distal	5.17257	7.71000	K562	FAM120A
chr7	76623211	76623317	+	intron-Distal	3.08542	4.62806	K562	CSTF2T
chr7	76626749	76626922	+	intron-Distal	6.09892	14.29284	K562	EWSR1
chr7	76626899	76626950	+	intron-Distal	5.73321	9.02011	K562	EIF4G2
chr7	76628218	76628279	+	intron-Distal	5.23133	8.17882	K562	FAM120A
chr7	76628219	76628293	+	intron-Distal	7.01116	15.88112	K562	FASTKD2
chr7	76626758	76626819	+	intron-Distal	4.78802	5.67757	HepG2	CSTF2T
chr7	76621253	76621307	+	intron-Distal	3.38894	3.68882	K562	FAM120A
chr7	76628191	76628292	+	intron-Distal	6.80011	27.43831	HepG2	FAM120A
chr7	76633643	76633664	+	intron-Distal,intron-Proximal	3.31195	5.10493	HepG2	AQR
chr7	76619654	76619744	+	intron-Distal,intron-Proximal	4.73026	9.10443	HepG2	PRPF8
chr7	76633652	76633667	+	intron-Distal,intron-Proximal	5.35334	8.03507	K562	AQR
chr7	76631476	76631587	+	intron-Distal,intron-Proximal	3.73286	5.80880	HepG2	GRWD1
chr7	76633623	76633652	+	intron-Distal,intron-Proximal	4.39234	7.15298	K562	AQR
chr7	76631638	76631730	+	intron-Distal,intron-Proximal	4.67206	4.86944	K562	AQR
chr7	76631478	76631531	+	intron-Distal,intron-Proximal	3.06248	5.14343	HepG2	PPIG
chr7	76669325	76669407	+	intron-Proximal	3.83058	7.89209	HepG2	BCLAF1
chr7	76633621	76633643	+	intron-Distal,intron-Proximal	3.49002	5.99700	HepG2	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for DTX2P1-UPK3BP1-PMS2P11 is not available on ENCORE database.
10 RBPs can affect the levels of DTX2P1-UPK3BP1-PMS2P11.

The Knockdown/knockout RNA-Seq assay for DTX2P1-UPK3BP1-PMS2P11 is not available on ENCORE database.

10 RBPs can affect the gene expression of DTX2P1-UPK3BP1-PMS2P11 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	26.65060	8.09090	1.71970	2.21400	1.71380	HepG2	PTBP1
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	34.21230	7.70100	2.15130	3.72080	3.04100	HepG2	PUF60
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	26.79960	8.16870	1.71390	2.20830	1.60600	HepG2	PUM2
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	26.78280	8.38740	1.67490	2.15570	1.60270	HepG2	RECQL
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	26.66650	7.38250	1.85270	2.61540	1.93100	HepG2	SLBP
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	24.53410	7.60270	1.69010	2.14820	1.58840	HepG2	SRSF5
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	21.04510	45.35340	-1.10770	1.89660	1.38100	HepG2	UTP3
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	23.26540	51.66450	-1.15100	2.60850	2.07350	HepG2	ZNF622
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	31.49740	10.16940	1.63090	2.21460	1.67170	K562	HNRNPC
DTX2P1-UPK3BP1-PMS2P11	ENSG00000265479.1	26.46660	55.10670	-1.05810	2.28010	1.31940	K562	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DTX2P1-UPK3BP1-PMS2P11

General Information

Functions

Localization

Domains (AlphaFold: DTX2P1-UPK3BP1-PMS2P11)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.

14 proteins are bound to DTX2P1-UPK3BP1-PMS2P11 RNA:

eCLIP assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DTX2P1-UPK3BP1-PMS2P11 is not available on ENCORE database.

10 RBPs can affect the gene expression of DTX2P1-UPK3BP1-PMS2P11 :

The Knockdown/knockout RNA-Seq assay for DTX2P1-UPK3BP1-PMS2P11 is not available on ENCORE database.

No RBPs affect the alternative splcing events of DTX2P1-UPK3BP1-PMS2P11 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for DTX2P1-UPK3BP1-PMS2P11 is not avaliable on ENCORE database.