CTC-490E21.12

General Information

Gene Name : CTC-490E21.12
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CTC-490E21.12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CTC-490E21.12 is not avaliable on ENCORE database.

Proteins bound to RNA

CTC-490E21.12 RNA is bound by 20 proteins.

eCLIP assay for CTC-490E21.12 is not avaliable on ENCORE database.

20 proteins are bound to CTC-490E21.12 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	41307318	41307342	+	3'-UTR,CDS,intron-Proximal	5.16736	6.44303	K562	AQR
chr19	41307218	41307321	+	3'-UTR,CDS,intron-Proximal	3.44090	3.09251	K562	METAP2
chr19	41313969	41314047	+	3'-UTR,intron-Distal,intron-Proximal	3.01753	3.44337	K562	METAP2
chr19	41310369	41310516	+	intron-Distal	3.71135	6.33414	K562	FUS
chr19	41309721	41309765	+	intron-Distal	3.14476	4.58795	K562	EWSR1
chr19	41314085	41314157	+	3'-UTR,intron-Distal	3.22150	3.76433	K562	DDX6
chr19	41310918	41310997	+	intron-Distal	3.48603	7.34646	K562	NONO
chr19	41321140	41321272	+	intron-Distal	4.76157	6.59655	K562	PTBP1
chr19	41335319	41335425	+	intron-Distal	4.84332	5.63677	K562	PTBP1
chr19	41310738	41310806	+	intron-Distal	3.81938	3.80037	K562	FUS
chr19	41312631	41312685	+	intron-Distal,intron-Proximal	4.06719	3.30664	K562	NONO
chr19	41313759	41313880	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.03349	8.84200	K562	PABPC4
chr19	41314063	41314165	+	3'-UTR,intron-Distal,intron-Proximal	5.42239	8.05720	K562	UPF1
chr19	41333305	41333387	+	intron-Distal	4.82407	6.36545	HepG2	HNRNPL
chr19	41309954	41310112	+	intron-Distal	3.50500	9.04624	K562	FUS
chr19	41314068	41314169	+	3'-UTR,intron-Distal	4.47243	3.87357	K562	EWSR1
chr19	41307458	41307510	+	intron-Distal	4.14904	4.27402	K562	CSTF2T
chr19	41321000	41321079	+	intron-Distal	4.42253	3.76275	K562	PTBP1
chr19	41333135	41333256	+	intron-Distal	5.13941	9.75957	K562	HNRNPL
chr19	41313663	41313727	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.15948	5.68247	K562	SF3B4
chr19	41310921	41310985	+	intron-Distal	3.79847	4.81215	K562	EWSR1
chr19	41311282	41311321	+	intron-Distal	3.35186	4.48425	K562	CSTF2T
chr19	41311046	41311108	+	intron-Distal	3.54119	4.47051	K562	EWSR1
chr19	41309943	41310073	+	intron-Distal	3.60395	8.60539	K562	EWSR1
chr19	41321004	41321058	+	intron-Distal	3.40934	3.10639	HepG2	PTBP1
chr19	41313548	41313700	+	3'-UTR,intron-Distal,intron-Proximal	5.23358	9.72234	K562	HNRNPK
chr19	41310957	41311083	+	intron-Distal	3.06374	3.63437	HepG2	HNRNPM
chr19	41310916	41311002	+	intron-Distal	3.52266	8.66194	K562	CSTF2T
chr19	41309735	41309776	+	intron-Distal	3.37277	3.74491	K562	CSTF2T
chr19	41308055	41308150	+	intron-Distal	4.57971	10.59779	K562	GTF2F1
chr19	41312988	41313067	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37709	3.64784	K562	EWSR1
chr19	41313569	41313666	+	3'-UTR,intron-Distal,intron-Proximal	4.20358	4.10192	HepG2	HNRNPK
chr19	41314235	41314298	+	3'-UTR,intron-Distal	4.84166	5.94928	K562	UPF1
chr19	41312583	41312654	+	intron-Distal,intron-Proximal	4.61151	5.68502	HepG2	PRPF8
chr19	41312534	41312580	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11172	3.50044	K562	YBX3
chr19	41314554	41314615	+	intron-Distal	4.03373	3.17740	K562	CSTF2T
chr19	41310895	41310975	+	intron-Distal	4.32929	5.52774	K562	FUS
chr19	41308181	41308272	+	intron-Distal	3.29297	5.64759	K562	NONO
chr19	41313959	41314003	+	3'-UTR,intron-Distal,intron-Proximal	3.99002	3.51664	K562	RBM15
chr19	41308277	41308354	+	intron-Distal	3.63967	6.95413	HepG2	PCBP2
chr19	41333279	41333384	+	intron-Distal	3.14355	3.90949	K562	HNRNPL
chr19	41333329	41333381	+	intron-Distal	5.16266	7.88608	K562	AGGF1
chr19	41310449	41310511	+	intron-Distal	3.09241	3.58403	K562	EWSR1
chr19	41309226	41309262	+	intron-Distal,intron-Proximal	3.41932	4.02206	K562	CSTF2T
chr19	41312902	41313006	+	intron-Distal,intron-Proximal	3.33194	6.01711	K562	CSTF2T
chr19	41313041	41313059	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02564	3.07714	K562	YBX3
chr19	41314387	41314441	+	intron-Distal	4.10593	4.36133	HepG2	CSTF2T
chr19	41308080	41308147	+	intron-Distal	3.11028	4.67846	K562	EWSR1
chr19	41307342	41307361	+	intron-Proximal	4.16736	5.63763	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CTC-490E21.12 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for CTC-490E21.12 is not available on ENCORE database.
No RBPs affect the gene expression of CTC-490E21.12 on ENCORE database.

CTC-490E21.12

General Information

Functions

Localization

Domains (AlphaFold: CTC-490E21.12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CTC-490E21.12 is not avaliable on ENCORE database.

20 proteins are bound to CTC-490E21.12 RNA:

eCLIP assay for CTC-490E21.12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CTC-490E21.12 is not available on ENCORE database.

No RBPs affect the gene expression of CTC-490E21.12 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CTC-490E21.12 is not available on ENCORE database.

No RBPs affect the alternative splcing events of CTC-490E21.12 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CTC-490E21.12 is not avaliable on ENCORE database.