CDH10

General Information

Gene Name       : CDH10
Gene ID             : ENSG00000040731.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CDH10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CDH10ENSG00000040731.100.000.030.01ENCSR000AEF
HepG2CDH10ENSG00000040731.100.020.020.02ENCSR985KAT
K562CDH10ENSG00000040731.100.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CDH10 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CDH10 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CDH10 is not avaliable on ENCORE database.






NO known proteins are bound to CDH10 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CDH10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CDH10 is not available on ENCORE database.

  • 13 RBPs can affect the levels of CDH10.  








The Knockdown/knockout RNA-Seq assay for CDH10 is not available on ENCORE database.





13 RBPs can affect the gene expression of CDH10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CDH10ENSG00000040731.610.629400.0000099999.999902.471301.96570HepG2AKAP1
CDH10ENSG00000040731.621.344000.731104.867605.400604.36910HepG2CALR
CDH10ENSG00000040731.616.051901.088503.882303.541602.80450HepG2CKAP4
CDH10ENSG00000040731.615.620401.727503.176602.609001.94740HepG2DDX21
CDH10ENSG00000040731.618.233901.063904.099104.072003.05950HepG2EWSR1
CDH10ENSG00000040731.613.081801.204903.440402.479501.63730HepG2GEMIN5
CDH10ENSG00000040731.617.308501.116203.954703.405302.48370HepG2LARP4
CDH10ENSG00000040731.628.241700.0000099999.999907.444106.44760HepG2MATR3
CDH10ENSG00000040731.627.011401.243904.440605.880305.19460HepG2RBM22
CDH10ENSG00000040731.646.967701.314405.1591010.705809.59280HepG2RPS19
CDH10ENSG00000040731.620.790000.451705.524304.577603.56270HepG2RPS2
CDH10ENSG00000040731.648.831804.560803.420408.932708.12660HepG2TIAL1
CDH10ENSG00000040731.617.025700.504505.076504.446403.11790HepG2XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CDH10 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CDH10 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CDH10 is not avaliable on ENCORE database.