CDADC1

General Information

Gene Name       : CDADC1
Gene ID             : ENSG00000102543.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CDADC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CDADC1ENSG00000102543.143.762.263.01ENCSR000AEF
HepG2CDADC1ENSG00000102543.143.145.614.38ENCSR985KAT
K562CDADC1ENSG00000102543.145.283.974.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CDADC1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CDADC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CDADC1 is not avaliable on ENCORE database.






NO known proteins are bound to CDADC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CDADC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CDADC1 is not available on ENCORE database.

  • 20 RBPs can affect the levels of CDADC1.  








The Knockdown/knockout RNA-Seq assay for CDADC1 is not available on ENCORE database.





20 RBPs can affect the gene expression of CDADC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CDADC1ENSG00000102543.1088.44800143.92260-0.702402.304601.58520HepG2ASCC1
CDADC1ENSG00000102543.1090.03960143.13220-0.668701.964501.43610HepG2DDX6
CDADC1ENSG00000102543.10138.6375089.051700.638502.277701.65320HepG2DKC1
CDADC1ENSG00000102543.1048.6171088.47130-0.863702.532201.85480HepG2DNAJC21
CDADC1ENSG00000102543.1084.42780137.59740-0.704702.236101.69710HepG2EIF2S1
CDADC1ENSG00000102543.10251.98410152.061700.728603.471202.75680HepG2EIF4A3
CDADC1ENSG00000102543.1083.61200148.05260-0.824302.532301.87280HepG2EIF4B
CDADC1ENSG00000102543.1087.86310142.32270-0.695802.326401.71390HepG2G3BP1
CDADC1ENSG00000102543.1081.93220144.66810-0.820202.918102.22810HepG2IGF2BP2
CDADC1ENSG00000102543.10277.70890153.476200.855504.818303.96040HepG2MAGOH
CDADC1ENSG00000102543.1076.03280168.70020-1.149806.490205.47860HepG2PUM2
CDADC1ENSG00000102543.1051.2772087.89110-0.777402.231701.64220HepG2SAFB2
CDADC1ENSG00000102543.10178.12340108.889800.709902.697402.00010HepG2SF3B1
CDADC1ENSG00000102543.1097.70220157.00830-0.684403.083902.42730HepG2SRSF5
CDADC1ENSG00000102543.10261.42030136.369700.938707.432906.67110HepG2SSB
CDADC1ENSG00000102543.1063.4579096.75610-0.608601.787101.31400HepG2TRIM56
CDADC1ENSG00000102543.10713.07560195.527501.8666031.3051029.52180K562AQR
CDADC1ENSG00000102543.10162.03180105.410200.620202.340001.58340K562EIF4A3
CDADC1ENSG00000102543.10165.97810109.621800.598402.355101.78840K562FXR1
CDADC1ENSG00000102543.10208.72450129.097000.693003.580302.61750K562MAGOH
CDADC1ENSG00000102543.10454.57180234.641100.954007.385106.04840K562PUF60
CDADC1ENSG00000102543.10183.37850122.949700.576702.212701.57190K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CDADC1 is not available on ENCORE database.





2 RBPs can affect the splicing of CDADC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECDADC1ENSG00000102543.10chr13+4984001449840139498334814983365949841625498416610.211000.001490.08906includedHepG2HNRNPL
SECDADC1ENSG00000102543.10chr13+498400144984013949833481498336594984162549841661-0.199000.005010.09119excludedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CDADC1 is not avaliable on ENCORE database.