AL021546.6

General Information

Gene Name : AL021546.6
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AL021546.6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AL021546.6 is not avaliable on ENCORE database.

Proteins bound to RNA

AL021546.6 RNA is bound by 22 proteins.

eCLIP assay for AL021546.6 is not avaliable on ENCORE database.

22 proteins are bound to AL021546.6 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	120876181	120876221	+	CDS,intron-Proximal	3.38318	7.54621	HepG2	DDX3X
chr12	120884461	120884561	+	5'-UTR,CDS	4.38398	5.35719	HepG2	GRWD1
chr12	120876181	120876203	+	CDS,intron-Proximal	5.34443	13.04630	K562	RPS3
chr12	120884459	120884508	+	5'-UTR,CDS,intron-Proximal	3.39869	3.86355	HepG2	PPIG
chr12	120894967	120895029	+	3'-UTR,CDS,intron-Proximal	3.94099	6.23016	HepG2	PRPF8
chr12	120875932	120876022	+	CDS	4.41992	27.97786	HepG2	SUB1
chr12	120884566	120884659	+	5'-UTR,CDS,intron-Proximal	3.72201	5.93218	HepG2	SRSF1
chr12	120875990	120876034	+	CDS,intron-Proximal	4.51957	27.00351	HepG2	RPS3
chr12	120875941	120876002	+	CDS	3.46363	4.71868	K562	GEMIN5
chr12	120875989	120876033	+	CDS,intron-Proximal	4.51719	38.12100	HepG2	LARP4
chr12	120875997	120876034	+	CDS,intron-Proximal	4.84361	13.05138	K562	RPS3
chr12	120875920	120876005	+	5'-UTR,CDS	3.86466	4.19293	K562	EIF3G
chr12	120884508	120884663	+	5'-UTR,CDS,intron-Proximal	4.45316	9.76012	HepG2	PPIG
chr12	120876181	120876188	+	CDS,intron-Proximal	5.18554	26.17545	HepG2	LARP4
chr12	120876180	120876225	+	CDS,intron-Proximal	4.78685	24.77900	HepG2	RPS3
chr12	120876188	120876225	+	CDS	5.34635	29.68674	HepG2	LARP4
chr12	120875992	120876034	+	CDS,intron-Proximal	3.56070	11.98970	HepG2	DDX3X
chr12	120878460	120878517	+	3'-UTR,intron-Distal	3.46467	8.91282	K562	TIA1
chr12	120878456	120878518	+	3'-UTR,intron-Distal	4.73227	4.78280	HepG2	AKAP1
chr12	120878437	120878503	+	3'-UTR,intron-Distal	3.06283	6.68342	K562	YBX3
chr12	120878474	120878485	+	3'-UTR,intron-Distal	4.12968	5.19791	K562	LARP4
chr12	120878317	120878408	+	3'-UTR,CDS,intron-Distal	5.55560	73.46483	HepG2	LARP4
chr12	120878485	120878526	+	3'-UTR,intron-Distal	6.69514	28.54341	K562	LARP4
chr12	120884289	120884364	+	CDS,intron-Distal,intron-Proximal	3.94621	3.60441	HepG2	GRWD1
chr12	120885345	120885404	+	intron-Distal	4.76924	9.54933	HepG2	RBFOX2
chr12	120878458	120878521	+	3'-UTR,intron-Distal	3.39551	5.95517	K562	APOBEC3C
chr12	120884273	120884370	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.35110	6.94422	HepG2	NCBP2
chr12	120884281	120884366	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.31347	4.38582	HepG2	SRSF1
chr12	120878179	120878285	+	CDS,intron-Distal,intron-Proximal	5.19963	7.23718	K562	AQR
chr12	120876344	120876428	+	intron-Distal,intron-Proximal	3.24128	7.03130	K562	PRPF8
chr12	120894501	120894582	+	intron-Distal	4.23911	5.81617	HepG2	QKI
chr12	120878453	120878517	+	3'-UTR,intron-Distal	4.63845	4.05830	HepG2	TIA1
chr12	120878343	120878411	+	3'-UTR,intron-Distal	4.22698	8.60748	K562	IGF2BP2
chr12	120878450	120878526	+	3'-UTR,intron-Distal	4.46852	12.67428	K562	PABPC4
chr12	120878306	120878395	+	3'-UTR,CDS,intron-Distal	3.02145	5.82388	HepG2	DDX55
chr12	120894582	120894643	+	intron-Distal	4.25569	3.16986	HepG2	QKI
chr12	120876383	120876438	+	intron-Distal,intron-Proximal	4.68137	4.09264	K562	AQR
chr12	120886144	120886193	+	intron-Distal	4.49040	6.29797	HepG2	HNRNPC
chr12	120878453	120878518	+	3'-UTR,intron-Distal	6.22022	74.72915	HepG2	LARP4
chr12	120878338	120878398	+	3'-UTR,intron-Distal	4.69692	23.03659	HepG2	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AL021546.6 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for AL021546.6 is not available on ENCORE database.
No RBPs affect the gene expression of AL021546.6 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AL021546.6 is not available on ENCORE database.

No RBPs affect the gene expression of AL021546.6 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AL021546.6 is not available on ENCORE database.

3 RBPs can affect the splicing of AL021546.6 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AL021546.6	ENSG00000111780.8	chr12	+	120892735	120892833	120884459	120884632	120894878	120894982	0.18400	0.00041	0.03023	included	HepG2	RBM22
SE	AL021546.6	ENSG00000111780.8	chr12	+	120892735	120892833	120884459	120884632	120894878	120894982	0.06800	0.00126	0.01486	included	K562	AQR
SE	AL021546.6	ENSG00000111780.8	chr12	+	120892735	120892833	120884459	120884632	120894878	120894982	0.13300	0.00020	0.00498	included	K562	HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AL021546.6

General Information

Functions

Localization

Domains (AlphaFold: AL021546.6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AL021546.6 is not avaliable on ENCORE database.

22 proteins are bound to AL021546.6 RNA:

eCLIP assay for AL021546.6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AL021546.6 is not available on ENCORE database.

No RBPs affect the gene expression of AL021546.6 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AL021546.6 is not available on ENCORE database.

3 RBPs can affect the splicing of AL021546.6 :

The Knockdown/knockout RNA-Seq assay for AL021546.6 is not avaliable on ENCORE database.