AC099668.5

General Information

Gene Name       : AC099668.5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC099668.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC099668.5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC099668.5 RNA is bound by 8 proteins.  







eCLIP assay for AC099668.5 is not avaliable on ENCORE database.





8 proteins are bound to AC099668.5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34972222549722305-CDS,intron-Distal,intron-Proximal4.4993224.37783HepG2PABPN1
chr34972224149722310-CDS,intron-Distal,intron-Proximal3.531773.73268HepG2WDR43
chr34972244649722457-CDS,intron-Distal,intron-Proximal4.0433311.53987HepG2PABPN1
chr34972202649722077-CDS,intron-Distal,intron-Proximal3.7804014.16703HepG2LSM11
chr34972230549722317-CDS,intron-Distal,intron-Proximal3.605387.61103HepG2PABPN1
chr34972249449722522-CDS,intron-Distal,intron-Proximal5.0269718.32808HepG2PPIG
chr34972199549722001-CDS,intron-Distal3.113535.25133HepG2LSM11
chr34972233449722432-intron-Distal,intron-Proximal3.7847217.78262HepG2SF3A3
chr34972227749722317-CDS,intron-Distal,intron-Proximal3.072887.92926HepG2LSM11
chr34972179449721833-CDS,intron-Distal,intron-Proximal3.5215113.11782HepG2PABPN1
chr34972222949722277-CDS,intron-Distal,intron-Proximal3.211779.07611HepG2LSM11
chr34972244549722469-CDS,intron-Distal,intron-Proximal5.1031113.50799HepG2PPIG
chr34972222049722290-CDS,intron-Distal,intron-Proximal3.269077.48233HepG2ZC3H11A
chr34972201749722082-CDS,intron-Distal,intron-Proximal3.9578722.19039HepG2PABPN1
chr34972218749722229-CDS,intron-Distal,intron-Proximal4.8963315.70082HepG2PPIG
chr34972245749722482-CDS,intron-Distal,intron-Proximal4.6031214.53405HepG2PABPN1
chr34972218249722225-CDS,intron-Distal,intron-Proximal4.8775418.32852HepG2PABPN1
chr34972251449722522-CDS,intron-Distal,intron-Proximal4.0271712.29841HepG2PABPN1
chr34972202449722079-CDS,intron-Distal,intron-Proximal4.5078718.22249HepG2PPIG
chr34972248749722511-CDS,intron-Distal,intron-Proximal3.289718.03766HepG2LSM11
chr34972248249722514-CDS,intron-Distal,intron-Proximal4.4530417.80674HepG2PABPN1
chr34972233849722401-intron-Distal,intron-Proximal3.982175.73648HepG2SF3B4
chr34972235449722433-intron-Distal,intron-Proximal3.147406.49528HepG2EFTUD2
chr34972222949722300-CDS,intron-Distal,intron-Proximal4.4959027.17448HepG2PPIG
chr34972251149722522-CDS,intron-Distal,intron-Proximal3.430706.45834HepG2LSM11
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC099668.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC099668.5 is not available on ENCORE database.

  • 15 RBPs can affect the levels of AC099668.5.  








The Knockdown/knockout RNA-Seq assay for AC099668.5 is not available on ENCORE database.





15 RBPs can affect the gene expression of AC099668.5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC099668.5ENSG00000259970.110.076200.0000099999.999902.161601.32660HepG2ABCF1
AC099668.5ENSG00000259970.12.2861021.87770-3.258504.165403.23770HepG2AKAP8L
AC099668.5ENSG00000259970.19.134100.434204.394902.093301.56810HepG2BOP1
AC099668.5ENSG00000259970.10.0000015.10940-99999.999994.041203.29120HepG2CELF1
AC099668.5ENSG00000259970.141.1828020.144101.031602.032301.30770HepG2DDX19B
AC099668.5ENSG00000259970.12.4676020.84180-3.078303.378402.63990HepG2DKC1
AC099668.5ENSG00000259970.165.1862021.597901.593603.522002.80280HepG2EIF4A3
AC099668.5ENSG00000259970.117.735302.786102.670203.154302.38490HepG2IGF2BP1
AC099668.5ENSG00000259970.158.2204021.805201.416803.132202.43470HepG2MAGOH
AC099668.5ENSG00000259970.123.375505.950501.973802.608001.59840HepG2PCBP2
AC099668.5ENSG00000259970.127.116506.984201.956902.594301.81990HepG2RPS3A
AC099668.5ENSG00000259970.137.4813014.083901.412002.515001.98290HepG2SRSF9
AC099668.5ENSG00000259970.183.9135015.717902.4164011.1519010.25630HepG2SSB
AC099668.5ENSG00000259970.12.4275017.27880-2.831502.235901.66600HepG2SUCLG1
AC099668.5ENSG00000259970.119.176205.107401.908602.047201.60390HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC099668.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AC099668.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AC099668.5 is not avaliable on ENCORE database.