AC006014.7

General Information

Gene Name       : AC006014.7
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC006014.7)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC006014.7 is not avaliable on ENCORE database.



Proteins bound to RNA

  • AC006014.7 RNA is bound by 11 proteins.  







eCLIP assay for AC006014.7 is not avaliable on ENCORE database.





11 proteins are bound to AC006014.7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77510395175104038-5'-UTR,intron-Distal,intron-Proximal3.234813.80299HepG2GRWD1
chr77510408875104149-5'-UTR,intron-Distal,intron-Proximal3.326243.85127HepG2GRWD1
chr77510395775104050-5'-UTR,intron-Distal,intron-Proximal4.1132013.60263K562ZNF622
chr77511496375115027-intron-Distal3.102654.34719K562TIA1
chr77510432675104360-5'-UTR,intron-Distal,intron-Proximal3.382003.05460HepG2PPIG
chr77510413175104149-5'-UTR,intron-Distal,intron-Proximal3.9003115.30554K562ZNF622
chr77510595075105970-intron-Distal3.201944.76345K562KHSRP
chr77511104275111098-intron-Distal4.031213.60940HepG2HNRNPC
chr77511504875115141-intron-Distal3.683426.32052K562AQR
chr77510432775104336-5'-UTR,intron-Distal,intron-Proximal4.1812315.32780K562ZNF622
chr77511349075113544-5'-UTR,intron-Distal,intron-Proximal3.239354.92880K562ZNF622
chr77510410075104149-5'-UTR,intron-Distal,intron-Proximal3.397006.67395K562DDX24
chr77510432675104387-5'-UTR,intron-Distal,intron-Proximal4.197464.69889HepG2GRWD1
chr77510625875106317-intron-Distal3.330885.17040K562KHSRP
chr77510432775104379-5'-UTR,intron-Distal,intron-Proximal3.239893.06830K562UPF1
chr77510633375106402-intron-Distal5.046448.06678K562TARDBP
chr77510408275104131-5'-UTR,intron-Distal3.3641713.10795K562ZNF622
chr77510433675104365-5'-UTR,intron-Distal3.6779215.33155K562ZNF622
chr77511543375115524-5'-UTR,intron-Distal,intron-Proximal3.677647.86459K562RBM15
chr77510845675108519-intron-Distal3.281003.90146K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC006014.7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC006014.7 is not available on ENCORE database.

  • 5 RBPs can affect the levels of AC006014.7.  








The Knockdown/knockout RNA-Seq assay for AC006014.7 is not available on ENCORE database.





5 RBPs can affect the gene expression of AC006014.7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC006014.7ENSG00000242073.216.965704.177402.021902.029401.32370K562EIF4A3
AC006014.7ENSG00000242073.26.1738025.71710-2.058502.727001.93730K562HSPD1
AC006014.7ENSG00000242073.211.410000.521704.450902.931401.97890K562MATR3
AC006014.7ENSG00000242073.29.306900.507004.198002.337701.72040K562PTBP1
AC006014.7ENSG00000242073.219.0941044.12330-1.208402.282801.53660K562SF3A3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC006014.7 is not available on ENCORE database.





6 RBPs can affect the splicing of AC006014.7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAC006014.7ENSG00000242073.2chr7-751134747511353375104327751044547511514075115385-0.200000.000250.00661excludedK562SF3B4
SEAC006014.7ENSG00000242073.2chr7-7511347475113533751043277510445475115140751153850.145000.000650.05588includedK562XRCC6
SEAC006014.7ENSG00000242073.2chr7-7511347475113533751043277510445475115140751153850.081000.000230.06205includedK562PUM1
SEAC006014.7ENSG00000242073.2chr7-751134747511353375104327751044547511514075115385-0.137000.000270.00564excludedK562PUS1
SEAC006014.7ENSG00000242073.2chr7-7511347475113533751043277510445475115140751153850.111000.000300.04589includedHepG2HNRNPUL1
A3SSAC006014.7ENSG00000242073.2chr7-7510397275104194751039727510414875104327751045250.074000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC006014.7 is not avaliable on ENCORE database.