WDR59

General Information

Gene Name : WDR59
Gene ID : ENSG00000103091.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WDR59)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WDR59	ENSG00000103091.14	19.66	22.22	20.94	ENCSR000AEF
HepG2	WDR59	ENSG00000103091.14	98.22	92.93	95.58	ENCSR985KAT
K562	WDR59	ENSG00000103091.14	34.42	39.65	37.03	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WDR59 is not avaliable on ENCORE database.

Proteins bound to RNA

WDR59 RNA is bound by 40 proteins.

CanvasJS.com

eCLIP assay for WDR59 is not avaliable on ENCORE database.

40 proteins are bound to WDR59 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	74923571	74923654	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.55764	61.96694	HepG2	PRPF8
chr16	74946053	74946112	-	CDS,intron-Distal,intron-Proximal	4.49972	48.44259	HepG2	PRPF8
chr16	75018856	75018927	-	5'-UTR,CDS,intron-Distal	4.42806	42.55602	HepG2	NCBP2
chr16	75018881	75018981	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51740	38.52420	HepG2	PRPF4
chr16	74949940	74950022	-	intron-Distal,intron-Proximal	4.56552	29.79523	HepG2	EFTUD2
chr16	74999670	74999720	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.52228	29.01335	HepG2	PPIG
chr16	75018927	75018990	-	5'-UTR,intron-Distal,intron-Proximal	4.11370	28.81873	HepG2	NCBP2
chr16	74919550	74919594	-	CDS,intron-Distal,intron-Proximal	5.30841	28.51319	HepG2	PPIG
chr16	74955842	74955926	-	CDS,intron-Distal,intron-Proximal	3.95316	27.91183	HepG2	PPIG
chr16	74949963	74949995	-	intron-Distal,intron-Proximal	5.75293	27.26686	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 231 entries

eCLIP assay for WDR59 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WDR59 is not available on ENCORE database.
82 RBPs can affect the levels of WDR59.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WDR59 is not available on ENCORE database.

82 RBPs can affect the gene expression of WDR59 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WDR59	ENSG00000103091.10	5032.08790	3089.13040	0.70390	29.92380	28.29160	HepG2	PUS1
WDR59	ENSG00000103091.10	2375.69740	3821.85940	-0.68590	19.32920	17.94270	HepG2	CELF1
WDR59	ENSG00000103091.10	1967.65030	3045.09760	-0.63000	18.69010	17.34390	HepG2	UTP3
WDR59	ENSG00000103091.10	1492.75900	2954.35840	-0.98490	19.34130	17.10820	K562	PUF60
WDR59	ENSG00000103091.10	2268.79910	3889.54900	-0.77770	15.58660	14.32530	HepG2	PUF60
WDR59	ENSG00000103091.10	2089.40380	3032.86550	-0.53760	15.28490	14.10020	HepG2	ACO1
WDR59	ENSG00000103091.10	619.72040	1227.42770	-0.98590	14.41310	12.68830	K562	PRPF8
WDR59	ENSG00000103091.10	541.98660	991.95320	-0.87200	14.35910	12.51160	K562	U2AF2
WDR59	ENSG00000103091.10	651.19460	1261.33600	-0.95380	14.36730	12.12330	K562	EFTUD2
WDR59	ENSG00000103091.10	1279.92450	2256.87130	-0.81830	13.27070	12.12070	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 98 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WDR59 is not available on ENCORE database.

23 RBPs can affect the splicing of WDR59 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	WDR59	ENSG00000103091.10	chr16	-	74990372	74990508	74985355	74985441	74999670	74999720	-0.12100	0.00052	excluded	HepG2	SRSF7
SE	WDR59	ENSG00000103091.10	chr16	-	74990372	74990508	74985355	74985441	74999670	74999720	-0.11100	0.00044	excluded	HepG2	PTBP1
SE	WDR59	ENSG00000103091.10	chr16	-	74933595	74933652	74927576	74927710	74937844	74937998	0.24000	0.00001	included	K562	U2AF1
SE	WDR59	ENSG00000103091.10	chr16	-	74921580	74921653	74920167	74920294	74926381	74926441	-0.15600	0.00002	excluded	HepG2	SF3A3
SE	WDR59	ENSG00000103091.10	chr16	-	74993247	74993490	74990381	74990508	74999670	74999720	0.26200	0.00000	included	HepG2	HNRNPC
SE	WDR59	ENSG00000103091.10	chr16	-	74933595	74933652	74927576	74927710	74937844	74938071	0.14000	0.00088	included	HepG2	PRPF4
SE	WDR59	ENSG00000103091.10	chr16	-	74993247	74993490	74990381	74990508	74999670	74999720	0.29600	0.00000	included	K562	HNRNPC
A3SS	WDR59	ENSG00000103091.10	chr16	-	74937844	74938071	74937844	74937998	74942805	74942973	0.08600	0.00002	longer	HepG2	SF3A3
A3SS	WDR59	ENSG00000103091.10	chr16	-	74937844	74938071	74937844	74937998	74942805	74942973	0.17900	0.00003	longer	HepG2	U2AF2
A3SS	WDR59	ENSG00000103091.10	chr16	-	74976635	74976865	74976635	74976724	74982416	74982506	0.08500	0.00000	longer	K562	AQR

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WDR59

General Information

Functions

Localization

Domains (AlphaFold: WDR59)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WDR59 is not avaliable on ENCORE database.

40 proteins are bound to WDR59 RNA:

eCLIP assay for WDR59 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WDR59 is not available on ENCORE database.

82 RBPs can affect the gene expression of WDR59 :

The Knockdown/knockout RNA-Seq assay for WDR59 is not available on ENCORE database.

23 RBPs can affect the splicing of WDR59 :

The Knockdown/knockout RNA-Seq assay for WDR59 is not avaliable on ENCORE database.