VILL

General Information

Gene Name : VILL
Gene ID : ENSG00000136059.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: VILL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	VILL	ENSG00000136059.14	0.26	0.96	0.61	ENCSR000AEF
HepG2	VILL	ENSG00000136059.14	1.98	0.71	1.34	ENCSR985KAT
K562	VILL	ENSG00000136059.14	6.30	6.58	6.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for VILL is not avaliable on ENCORE database.

Proteins bound to RNA

VILL RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for VILL is not avaliable on ENCORE database.

10 proteins are bound to VILL RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	38046137	38046241	+	intron-Distal	7.46999	39.23079	K562	EIF4G2
chr3	38047144	38047253	+	intron-Distal,intron-Proximal	4.59825	31.69411	K562	EIF4G2
chr3	38045952	38046027	+	intron-Distal,intron-Proximal	6.89176	21.92335	K562	EIF4G2
chr3	38046721	38046815	+	intron-Distal	5.68532	21.43267	K562	EIF4G2
chr3	38046538	38046634	+	intron-Distal	4.96690	19.56462	K562	TARDBP
chr3	38046622	38046721	+	intron-Distal	5.71649	18.73721	K562	EIF4G2
chr3	38046114	38046255	+	intron-Distal	5.31789	17.72170	K562	TARDBP
chr3	38041227	38041299	+	intron-Distal	4.45935	15.85284	K562	AGGF1
chr3	38041164	38041227	+	intron-Distal	4.09087	15.17607	K562	AGGF1
chr3	38040940	38041164	+	intron-Distal,intron-Proximal	3.25406	13.63827	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 44 entries

eCLIP assay for VILL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for VILL is not available on ENCORE database.
46 RBPs can affect the levels of VILL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for VILL is not available on ENCORE database.

46 RBPs can affect the gene expression of VILL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
VILL	ENSG00000136059.10	202.32090	52.02540	1.95930	13.07440	11.85130	HepG2	DDX6
VILL	ENSG00000136059.10	3.16080	59.19100	-4.22700	12.04280	11.20490	HepG2	SRSF1
VILL	ENSG00000136059.10	75.60730	12.32960	2.61630	10.78610	9.78200	HepG2	TRIM56
VILL	ENSG00000136059.10	26.04700	105.56420	-2.01890	8.75910	7.35310	K562	G3BP2
VILL	ENSG00000136059.10	500.76670	270.11840	0.89040	8.01200	6.67330	K562	HSPD1
VILL	ENSG00000136059.10	6.79720	48.64160	-2.83920	6.79440	6.10610	HepG2	SRFBP1
VILL	ENSG00000136059.10	516.32720	339.36550	0.60530	5.96310	5.05850	K562	DDX47
VILL	ENSG00000136059.10	496.27450	332.25770	0.57870	5.59720	4.61450	K562	UPF1
VILL	ENSG00000136059.10	482.95500	295.67790	0.70780	5.64170	4.47640	K562	WDR43
VILL	ENSG00000136059.10	76.61710	28.70440	1.41630	4.96410	4.06660	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for VILL is not available on ENCORE database.

8 RBPs can affect the splicing of VILL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	VILL	ENSG00000136059.10	chr3	+	38045990	38046119			38042397	38045890	38047282	38047465	0.94200	0.00000	0.00000	included	K562	TARDBP
RI	VILL	ENSG00000136059.10	chr3	+	38047671	38048191			38047671	38047743	38047939	38048191	-0.35400	0.00000	0.00039	excluded	K562	TROVE2
MXE	VILL	ENSG00000136059.10	chr3	+	38043886	38044066	38044658	38044804	38043192	38043351	38045745	38045890	0.24300	0.00000	0.00294	1included	K562	SRSF7
RI	VILL	ENSG00000136059.10	chr3	+	38047671	38048191			38047671	38047743	38047939	38048191	-0.12100	0.00147	0.07975	excluded	HepG2	DDX6
SE	VILL	ENSG00000136059.10	chr3	+	38044658	38044804			38043886	38044066	38045745	38045890	-0.20900	0.00329	0.08209	excluded	K562	UTP18
RI	VILL	ENSG00000136059.10	chr3	+	38047671	38048191			38047671	38047743	38047939	38048191	0.41200	0.00410	0.02633	included	K562	PUS1
RI	VILL	ENSG00000136059.10	chr3	+	38047671	38048191			38047671	38047743	38047939	38048191	0.30100	0.00450	0.02617	included	K562	AQR
RI	VILL	ENSG00000136059.10	chr3	+	38047671	38048191			38047671	38047743	38047939	38048191	0.27900	0.01178	0.09069	included	K562	EFTUD2

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

VILL

General Information

Functions

Localization

Domains (AlphaFold: VILL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for VILL is not avaliable on ENCORE database.

10 proteins are bound to VILL RNA:

eCLIP assay for VILL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for VILL is not available on ENCORE database.

46 RBPs can affect the gene expression of VILL :

The Knockdown/knockout RNA-Seq assay for VILL is not available on ENCORE database.

8 RBPs can affect the splicing of VILL :

The Knockdown/knockout RNA-Seq assay for VILL is not avaliable on ENCORE database.