SNX15

General Information

Gene Name : SNX15
Gene ID : ENSG00000110025.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SNX15)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SNX15	ENSG00000110025.12	0.22	10.08	5.15	ENCSR000AEF
HepG2	SNX15	ENSG00000110025.12	20.21	12.65	16.43	ENCSR985KAT
K562	SNX15	ENSG00000110025.12	17.84	13.50	15.67	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SNX15 is not avaliable on ENCORE database.

Proteins bound to RNA

SNX15 RNA is bound by 1 proteins.

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eCLIP assay for SNX15 is not avaliable on ENCORE database.

1 proteins are bound to SNX15 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	64802365	64802379	+	3'-UTR,CDS,intron-Distal	3.66407	3.22721	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for SNX15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SNX15 is not available on ENCORE database.
91 RBPs can affect the levels of SNX15.

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The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.

91 RBPs can affect the gene expression of SNX15 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SNX15	ENSG00000110025.8	574.26550	69.55470	3.04540	83.16850	80.72500	HepG2	SUCLG1
SNX15	ENSG00000110025.8	530.45470	61.16570	3.11630	79.83470	77.17320	HepG2	SRSF5
SNX15	ENSG00000110025.8	386.25620	60.52490	2.67390	42.55740	39.35230	HepG2	TUFM
SNX15	ENSG00000110025.8	687.90640	158.82840	2.11460	34.61330	31.88320	K562	RPS19
SNX15	ENSG00000110025.8	1011.34880	155.97610	2.69680	31.58540	29.63150	K562	DDX47
SNX15	ENSG00000110025.8	37.86340	579.22750	-3.93530	26.15360	24.66200	HepG2	TAF15
SNX15	ENSG00000110025.8	954.30470	370.11850	1.36640	21.06160	19.26610	HepG2	U2AF1
SNX15	ENSG00000110025.8	429.72580	847.08770	-0.97910	18.56800	17.57390	HepG2	SRFBP1
SNX15	ENSG00000110025.8	483.89740	59.40610	3.02590	12.40580	11.10220	HepG2	SLBP
SNX15	ENSG00000110025.8	500.88840	61.94010	3.01540	11.98870	10.86650	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.

4 RBPs can affect the splicing of SNX15 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SNX15	ENSG00000110025.8	chr11	+	64806043	64806301	64802991	64803135	64807157	64808044	-0.36000	0.00000	0.00000	excluded	HepG2	U2AF1
SE	SNX15	ENSG00000110025.8	chr11	+	64799639	64799675	64795011	64795108	64799902	64800023	-0.15800	0.00000	0.00000	excluded	HepG2	U2AF1
SE	SNX15	ENSG00000110025.8	chr11	+	64806043	64806301	64802991	64803135	64807157	64808044	-0.27800	0.00000	0.00007	excluded	HepG2	SRSF1
SE	SNX15	ENSG00000110025.8	chr11	+	64802530	64802678	64802318	64802434	64802991	64806301	-0.39300	0.00004	0.00128	excluded	HepG2	U2AF1
SE	SNX15	ENSG00000110025.8	chr11	+	64799639	64799675	64795011	64795108	64799902	64800023	-0.12200	0.00106	0.02025	excluded	K562	HNRNPC
RI	SNX15	ENSG00000110025.8	chr11	+	64802991	64806301	64802991	64803135	64806043	64806301	0.07400	0.00460	0.04181	included	HepG2	RBM22

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SNX15

General Information

Functions

Localization

Domains (AlphaFold: SNX15)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SNX15 is not avaliable on ENCORE database.

1 proteins are bound to SNX15 RNA:

eCLIP assay for SNX15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.

91 RBPs can affect the gene expression of SNX15 :

The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.

4 RBPs can affect the splicing of SNX15 :

The Knockdown/knockout RNA-Seq assay for SNX15 is not avaliable on ENCORE database.