SNAPC2

General Information

Gene Name : SNAPC2
Gene ID : ENSG00000104976.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SNAPC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SNAPC2	ENSG00000104976.11	0.54	3.70	2.12	ENCSR000AEF
HepG2	SNAPC2	ENSG00000104976.11	10.87	3.15	7.01	ENCSR985KAT
K562	SNAPC2	ENSG00000104976.11	28.79	12.26	20.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SNAPC2 is not avaliable on ENCORE database.

Proteins bound to RNA

SNAPC2 RNA is bound by 2 proteins.

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eCLIP assay for SNAPC2 is not avaliable on ENCORE database.

2 proteins are bound to SNAPC2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	7987792	7987951	+	3'-UTR	4.78972	6.71037	HepG2	UPF1
chr19	7987848	7987945	+	3'-UTR	3.52341	6.25570	K562	UPF1
chr19	7988007	7988071	+	3'-UTR	3.80025	3.15159	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 3 of 3 entries

eCLIP assay for SNAPC2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for SNAPC2 is not available on ENCORE database.
79 RBPs can affect the levels of SNAPC2.

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The Knockdown/knockout RNA-Seq assay for SNAPC2 is not available on ENCORE database.

79 RBPs can affect the gene expression of SNAPC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SNAPC2	ENSG00000104976.7	796.03380	435.77530	0.86910	13.30550	11.99960	K562	RBM15
SNAPC2	ENSG00000104976.7	747.60120	433.40690	0.78640	11.88770	10.80230	K562	AGGF1
SNAPC2	ENSG00000104976.7	209.54040	78.21630	1.42160	11.64210	10.18860	HepG2	PPIL4
SNAPC2	ENSG00000104976.7	128.36870	270.11510	-1.07330	8.20420	7.48950	HepG2	SRSF1
SNAPC2	ENSG00000104976.7	280.31650	128.49660	1.12520	9.06020	7.46380	K562	TIA1
SNAPC2	ENSG00000104976.7	198.49450	78.61230	1.33620	8.37940	7.20830	HepG2	DNAJC21
SNAPC2	ENSG00000104976.7	190.02450	85.97240	1.14410	8.05120	7.16810	HepG2	TRIM56
SNAPC2	ENSG00000104976.7	100.90890	242.80000	-1.26670	7.94810	7.07660	HepG2	TAF15
SNAPC2	ENSG00000104976.7	172.29110	77.91260	1.14480	7.67620	6.66020	HepG2	DNAJC2
SNAPC2	ENSG00000104976.7	518.09660	288.55940	0.84430	8.10470	6.52920	K562	PPIG
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 83 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SNAPC2

General Information

Functions

Localization

Domains (AlphaFold: SNAPC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SNAPC2 is not avaliable on ENCORE database.

2 proteins are bound to SNAPC2 RNA:

eCLIP assay for SNAPC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SNAPC2 is not available on ENCORE database.

79 RBPs can affect the gene expression of SNAPC2 :

The Knockdown/knockout RNA-Seq assay for SNAPC2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of SNAPC2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for SNAPC2 is not avaliable on ENCORE database.