PSMC2

General Information

Gene Name : PSMC2
Gene ID : ENSG00000161057.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PSMC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PSMC2	ENSG00000161057.11	186.07	162.12	174.09	ENCSR000AEF
HepG2	PSMC2	ENSG00000161057.11	125.16	172.59	148.88	ENCSR985KAT
K562	PSMC2	ENSG00000161057.11	367.96	381.55	374.75	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PSMC2 is not avaliable on ENCORE database.

Proteins bound to RNA

PSMC2 RNA is bound by 17 proteins.

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eCLIP assay for PSMC2 is not avaliable on ENCORE database.

17 proteins are bound to PSMC2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	103004689	103004744	+	CDS	5.64184	49.33373	K562	PUM2
chr7	103004744	103004755	+	CDS,intron-Proximal	5.86680	32.27742	K562	PUM2
chr7	103006522	103006550	+	CDS,intron-Proximal	5.06224	26.42481	K562	PUM2
chr7	102988237	102988279	+	intron-Proximal	5.01963	15.45935	K562	AQR
chr7	102988131	102988232	+	5'-UTR,CDS,intron-Proximal	3.14865	14.37271	K562	UCHL5
chr7	102988176	102988237	+	5'-UTR,CDS,intron-Proximal	3.36520	12.13488	K562	AQR
chr7	103004635	103004679	+	CDS	5.56091	11.69058	K562	RPS3
chr7	102989589	102989679	+	intron-Distal	4.72372	11.65716	K562	PTBP1
chr7	102988125	102988230	+	5'-UTR,CDS,intron-Proximal	3.70633	10.72017	K562	GRWD1
chr7	103004603	103004706	+	CDS	3.84008	10.69038	K562	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 46 entries

eCLIP assay for PSMC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PSMC2 is not available on ENCORE database.
79 RBPs can affect the levels of PSMC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PSMC2 is not available on ENCORE database.

79 RBPs can affect the gene expression of PSMC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PSMC2	ENSG00000161057.6	2514.14030	1386.09610	0.85890	37.69830	36.28200	HepG2	ZNF622
PSMC2	ENSG00000161057.6	2760.21790	1516.05960	0.86440	31.35050	30.13860	HepG2	SRSF1
PSMC2	ENSG00000161057.6	4906.83130	2923.95540	0.74680	24.90280	23.20700	K562	FXR1
PSMC2	ENSG00000161057.6	738.83790	1221.15420	-0.72490	15.98830	14.63250	HepG2	SAFB2
PSMC2	ENSG00000161057.6	853.84850	1822.20990	-1.09360	14.50310	12.74830	HepG2	EIF4G2
PSMC2	ENSG00000161057.6	2063.47720	1233.66560	0.74200	10.46930	9.22780	HepG2	U2AF1
PSMC2	ENSG00000161057.6	1282.39050	1848.68990	-0.52770	10.46200	9.18400	HepG2	HNRNPF
PSMC2	ENSG00000161057.6	2949.70830	1683.00280	0.80940	9.85880	8.92170	HepG2	AKAP1
PSMC2	ENSG00000161057.6	1000.39930	1400.68640	-0.48560	9.89660	8.59600	HepG2	ILF2
PSMC2	ENSG00000161057.6	5137.58690	3332.77530	0.62430	9.47600	8.08490	K562	PRPF8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 88 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PSMC2 is not available on ENCORE database.

3 RBPs can affect the splicing of PSMC2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PSMC2	ENSG00000161057.6	chr7	+	102994367	102994405			102988109	102988228	103002403	103002535	-0.17000	0.00000	0.00000	excluded	K562	AQR
A3SS	PSMC2	ENSG00000161057.6	chr7	+	103003132	103003205			103003141	103003205	103002403	103002535	-0.11800	0.00000	0.00000	shorter	K562	SF3B4
MXE	PSMC2	ENSG00000161057.6	chr7	+	102996140	102996240	103002403	103002535	102995314	102995396	103003790	103003886	-0.06300	0.00000	0.00000	2included	K562	AQR
MXE	PSMC2	ENSG00000161057.6	chr7	+	102996140	102996240	103002403	103002497	102995314	102995396	103003790	103003886	-0.05400	0.00000	0.00000	2included	K562	AQR
MXE	PSMC2	ENSG00000161057.6	chr7	+	102996140	102996240	103002403	103002535	102995314	102995396	103003132	103003205	0.17200	0.00003	0.00152	1included	HepG2	DDX55
A3SS	PSMC2	ENSG00000161057.6	chr7	+	103003132	103003205			103003141	103003205	103002403	103002535	-0.05900	0.00125	0.08040	shorter	HepG2	SF3B4
SE	PSMC2	ENSG00000161057.6	chr7	+	102995314	102995396			102987956	102988228	103002403	103002535	-0.29000	0.00410	0.06361	excluded	K562	SF3B4
MXE	PSMC2	ENSG00000161057.6	chr7	+	103002403	103002497	103003141	103003205	102996029	102996240	103003790	103003886	-0.07900	0.00600	0.04195	2included	K562	AQR
MXE	PSMC2	ENSG00000161057.6	chr7	+	103002403	103002455	103003141	103003205	102996029	102996240	103003790	103003886	-0.07700	0.00903	0.05827	2included	K562	AQR
MXE	PSMC2	ENSG00000161057.6	chr7	+	103002403	103002535	103003141	103003205	102996029	102996240	103003790	103003886	-0.07300	0.00968	0.06167	2included	K562	AQR

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PSMC2

General Information

Functions

Localization

Domains (AlphaFold: PSMC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PSMC2 is not avaliable on ENCORE database.

17 proteins are bound to PSMC2 RNA:

eCLIP assay for PSMC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PSMC2 is not available on ENCORE database.

79 RBPs can affect the gene expression of PSMC2 :

The Knockdown/knockout RNA-Seq assay for PSMC2 is not available on ENCORE database.

3 RBPs can affect the splicing of PSMC2 :

The Knockdown/knockout RNA-Seq assay for PSMC2 is not avaliable on ENCORE database.