POFUT1

General Information

Gene Name : POFUT1
Gene ID : ENSG00000101346.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: POFUT1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POFUT1	ENSG00000101346.13	15.20	17.05	16.12	ENCSR000AEF
HepG2	POFUT1	ENSG00000101346.13	43.18	43.14	43.16	ENCSR985KAT
K562	POFUT1	ENSG00000101346.13	23.65	23.09	23.37	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POFUT1 is not avaliable on ENCORE database.

Proteins bound to RNA

POFUT1 RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for POFUT1 is not avaliable on ENCORE database.

24 proteins are bound to POFUT1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	30823589	30823713	+	3'-UTR,intron-Distal	7.74209	60.72265	HepG2	UPF1
chr20	30824145	30824202	+	3'-UTR,intron-Proximal	5.85831	56.25631	HepG2	UPF1
chr20	30795701	30795781	+	5'-UTR,CDS	5.12503	51.29710	HepG2	DDX3X
chr20	30823554	30823712	+	3'-UTR,intron-Distal	4.60169	40.15804	HepG2	AKAP1
chr20	30795781	30795854	+	5'-UTR,CDS	4.30851	36.33653	HepG2	DDX3X
chr20	30825217	30825273	+	3'-UTR	5.42036	31.45287	HepG2	UPF1
chr20	30825273	30825370	+	3'-UTR	5.26953	30.28291	HepG2	UPF1
chr20	30824202	30824288	+	3'-UTR,intron-Proximal	6.79118	29.13123	HepG2	UPF1
chr20	30822450	30822557	+	3'-UTR,CDS	6.63815	28.36857	HepG2	UPF1
chr20	30825189	30825217	+	3'-UTR	5.68186	23.93403	HepG2	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 88 entries

eCLIP assay for POFUT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POFUT1 is not available on ENCORE database.
96 RBPs can affect the levels of POFUT1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for POFUT1 is not available on ENCORE database.

96 RBPs can affect the gene expression of POFUT1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POFUT1	ENSG00000101346.7	2194.02300	4010.26780	-0.87010	38.68650	37.28830	HepG2	SSB
POFUT1	ENSG00000101346.7	994.11500	2501.89460	-1.33150	28.65290	26.47590	HepG2	XRN2
POFUT1	ENSG00000101346.7	1952.74220	3508.22180	-0.84520	26.88770	25.37580	HepG2	TAF15
POFUT1	ENSG00000101346.7	4619.87630	2900.01730	0.67170	21.94590	20.13360	HepG2	PRPF4
POFUT1	ENSG00000101346.7	1161.31830	2541.56840	-1.13000	18.49570	17.01270	HepG2	SUPV3L1
POFUT1	ENSG00000101346.7	1583.85980	3074.10700	-0.95670	17.62250	15.98070	HepG2	U2AF1
POFUT1	ENSG00000101346.7	1644.69810	803.02440	1.03420	17.28150	15.88120	K562	FXR1
POFUT1	ENSG00000101346.7	579.99950	1350.96640	-1.21990	15.65610	14.40400	K562	PUS1
POFUT1	ENSG00000101346.7	1998.23210	2862.02350	-0.51830	15.16020	13.79280	HepG2	ZC3H8
POFUT1	ENSG00000101346.7	1942.44250	2728.50620	-0.49020	14.87900	13.56990	HepG2	SMN1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POFUT1 is not available on ENCORE database.

9 RBPs can affect the splicing of POFUT1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	0.06100	0.00000	0.00030	included	HepG2	RBM22
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	0.17500	0.00000	0.00008	included	K562	HNRNPC
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	0.15100	0.00009	0.00318	included	K562	U2AF1
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	-0.05900	0.00037	0.01832	excluded	K562	PTBP1
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	-0.06300	0.00042	0.02347	excluded	K562	HNRNPK
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	-0.06000	0.00049	0.01159	excluded	K562	SRSF1
SE	POFUT1	ENSG00000101346.7	chr20	+	30797873	30797995	30795695	30795868	30803071	30803254	-0.10300	0.00148	0.02856	excluded	HepG2	U2AF1
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	-0.07500	0.00220	0.04945	excluded	K562	RBM15
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	0.10000	0.00242	0.04075	included	K562	U2AF2
SE	POFUT1	ENSG00000101346.7	chr20	+	30810435	30810636	30804411	30804524	30816065	30816258	-0.07000	0.00544	0.06640	excluded	K562	PUS1

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POFUT1

General Information

Functions

Localization

Domains (AlphaFold: POFUT1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POFUT1 is not avaliable on ENCORE database.

24 proteins are bound to POFUT1 RNA:

eCLIP assay for POFUT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POFUT1 is not available on ENCORE database.

96 RBPs can affect the gene expression of POFUT1 :

The Knockdown/knockout RNA-Seq assay for POFUT1 is not available on ENCORE database.

9 RBPs can affect the splicing of POFUT1 :

The Knockdown/knockout RNA-Seq assay for POFUT1 is not avaliable on ENCORE database.