PLEKHA4

General Information

Gene Name : PLEKHA4
Gene ID : ENSG00000105559.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLEKHA4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLEKHA4	ENSG00000105559.11	0.94	2.41	1.68	ENCSR000AEF
HepG2	PLEKHA4	ENSG00000105559.11	8.05	2.60	5.33	ENCSR985KAT
K562	PLEKHA4	ENSG00000105559.11	13.31	7.69	10.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLEKHA4 is not avaliable on ENCORE database.

Proteins bound to RNA

PLEKHA4 RNA is bound by 6 proteins.

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eCLIP assay for PLEKHA4 is not avaliable on ENCORE database.

6 proteins are bound to PLEKHA4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	49357073	49357139	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.64843	8.79534	K562	TIA1
chr19	49355547	49355637	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.27672	7.41223	K562	SF3B4
chr19	49348562	49348627	-	intron-Distal,intron-Proximal	4.61227	6.77156	K562	AQR
chr19	49356374	49356476	-	intron-Distal	4.33800	4.92524	K562	TARDBP
chr19	49340384	49340447	-	3'-UTR,intron-Distal,intron-Proximal	3.47318	3.42164	K562	UPF1
chr19	49356137	49356201	-	intron-Distal	4.42488	3.41592	K562	XRCC6
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 6 of 6 entries

eCLIP assay for PLEKHA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PLEKHA4 is not available on ENCORE database.
99 RBPs can affect the levels of PLEKHA4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PLEKHA4 is not available on ENCORE database.

99 RBPs can affect the gene expression of PLEKHA4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLEKHA4	ENSG00000105559.7	551.63970	195.67660	1.49520	28.11090	26.51180	HepG2	CELF1
PLEKHA4	ENSG00000105559.7	508.76110	186.15600	1.45040	24.88110	23.36870	HepG2	PCBP1
PLEKHA4	ENSG00000105559.7	176.54530	456.58670	-1.37090	19.49890	18.00740	K562	FXR1
PLEKHA4	ENSG00000105559.7	584.26800	260.08230	1.16760	14.41110	12.54670	K562	TARDBP
PLEKHA4	ENSG00000105559.7	93.37720	285.53090	-1.61250	13.19850	11.96090	HepG2	HNRNPLL
PLEKHA4	ENSG00000105559.7	408.93850	189.42460	1.11020	12.88910	11.88160	HepG2	PTBP1
PLEKHA4	ENSG00000105559.7	467.27140	188.75980	1.30760	12.14520	10.95890	HepG2	DDX6
PLEKHA4	ENSG00000105559.7	732.44060	335.20930	1.12750	12.03550	9.60140	K562	ABCF1
PLEKHA4	ENSG00000105559.7	426.65200	190.10990	1.16610	10.76070	9.46510	HepG2	HNRNPK
PLEKHA4	ENSG00000105559.7	334.93140	167.46900	0.99990	10.40130	9.45010	HepG2	SRSF9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 111 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PLEKHA4 is not available on ENCORE database.

13 RBPs can affect the splicing of PLEKHA4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PLEKHA4	ENSG00000105559.7	chr19	-	49347759	49347910			49344405	49344567	49348626	49348703	-0.08300	0.00000	0.00015	excluded	K562	HNRNPC
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49362116	49362396	49362458	49362596	49360678	49360753	49362725	49362941	0.17900	0.00002	0.00379	1included	K562	HNRNPL
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49357473	49357521	49362116	49362396	49357263	49357344	49362725	49362941	0.20000	0.00007	0.00555	1included	K562	SBDS
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49342461	49342520	49344405	49344567	49341273	49341386	49348626	49348703	-0.21200	0.00050	0.03288	2included	K562	PHF6
SE	PLEKHA4	ENSG00000105559.7	chr19	-	49342461	49342520			49341273	49341386	49344405	49344567	-0.33300	0.00072	0.05594	excluded	K562	SUPV3L1
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49362116	49362396	49362458	49362596	49360678	49360753	49362725	49362941	-0.26900	0.00168	0.07660	2included	K562	HNRNPK
SE	PLEKHA4	ENSG00000105559.7	chr19	-	49342461	49342520			49341273	49341386	49344405	49344567	-0.28600	0.00204	0.08542	excluded	K562	EFTUD2
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49342461	49342520	49344405	49344567	49341273	49341386	49348626	49348703	0.27000	0.00219	0.05870	1included	K562	EFTUD2
SE	PLEKHA4	ENSG00000105559.7	chr19	-	49342461	49342520			49341273	49341386	49344405	49344567	-0.34800	0.00222	0.06709	excluded	K562	PRPF8
MXE	PLEKHA4	ENSG00000105559.7	chr19	-	49362116	49362396	49362458	49362596	49360678	49360753	49362725	49362941	-0.22900	0.00222	0.08482	2included	K562	IGF2BP2

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLEKHA4

General Information

Functions

Localization

Domains (AlphaFold: PLEKHA4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLEKHA4 is not avaliable on ENCORE database.

6 proteins are bound to PLEKHA4 RNA:

eCLIP assay for PLEKHA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLEKHA4 is not available on ENCORE database.

99 RBPs can affect the gene expression of PLEKHA4 :

The Knockdown/knockout RNA-Seq assay for PLEKHA4 is not available on ENCORE database.

13 RBPs can affect the splicing of PLEKHA4 :

The Knockdown/knockout RNA-Seq assay for PLEKHA4 is not avaliable on ENCORE database.