PLCB3

General Information

Gene Name : PLCB3
Gene ID : ENSG00000149782.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLCB3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLCB3	ENSG00000149782.11	0.68	2.45	1.57	ENCSR000AEF
HepG2	PLCB3	ENSG00000149782.11	14.29	5.27	9.78	ENCSR985KAT
K562	PLCB3	ENSG00000149782.11	17.25	10.79	14.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLCB3 is not avaliable on ENCORE database.

Proteins bound to RNA

PLCB3 RNA is bound by 21 proteins.

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eCLIP assay for PLCB3 is not avaliable on ENCORE database.

21 proteins are bound to PLCB3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	64035142	64035191	+	3'-UTR,intron-Distal	3.43679	17.31145	K562	DDX55
chr11	64035213	64035277	+	3'-UTR,intron-Distal	4.70847	13.70377	K562	PABPC4
chr11	64035205	64035273	+	3'-UTR,intron-Distal	3.63592	12.88800	K562	DDX6
chr11	64023088	64023132	+	intron-Proximal	4.71388	10.26000	K562	SSB
chr11	64035195	64035265	+	3'-UTR,intron-Distal	3.46493	9.41693	K562	DDX55
chr11	64029142	64029228	+	intron-Proximal	5.49810	8.03507	K562	AQR
chr11	64026715	64026758	+	CDS,intron-Proximal	5.41611	7.81430	K562	AQR
chr11	64022220	64022242	+	CDS,intron-Distal	3.67059	7.13692	K562	ZNF622
chr11	64022235	64022290	+	CDS,intron-Distal,intron-Proximal	4.74272	6.92541	HepG2	PPIG
chr11	64022227	64022282	+	CDS,intron-Distal	4.04758	6.80284	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 50 entries

eCLIP assay for PLCB3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PLCB3 is not available on ENCORE database.
92 RBPs can affect the levels of PLCB3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PLCB3 is not available on ENCORE database.

92 RBPs can affect the gene expression of PLCB3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLCB3	ENSG00000149782.7	214.97100	716.24120	-1.73630	37.77360	36.28780	HepG2	RBM22
PLCB3	ENSG00000149782.7	272.14730	723.53020	-1.41070	20.21840	18.47000	HepG2	U2AF1
PLCB3	ENSG00000149782.7	425.55730	808.95870	-0.92670	17.08190	16.11500	HepG2	SRFBP1
PLCB3	ENSG00000149782.7	254.79300	569.49350	-1.16040	15.11650	13.56670	HepG2	CALR
PLCB3	ENSG00000149782.7	304.18520	666.84250	-1.13240	14.69320	13.46610	HepG2	BOP1
PLCB3	ENSG00000149782.7	298.33230	643.07350	-1.10810	14.06920	12.75220	HepG2	RPLP0
PLCB3	ENSG00000149782.7	112.37160	346.62720	-1.62510	14.57880	12.66300	K562	G3BP2
PLCB3	ENSG00000149782.7	300.96090	693.91410	-1.20520	13.62090	12.30560	HepG2	GPKOW
PLCB3	ENSG00000149782.7	371.19730	642.20470	-0.79080	12.27670	11.07770	HepG2	CKAP4
PLCB3	ENSG00000149782.7	368.88510	817.28680	-1.14770	11.95810	10.49770	HepG2	SF3A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 100 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PLCB3 is not available on ENCORE database.

3 RBPs can affect the splicing of PLCB3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PLCB3	ENSG00000149782.7	chr11	+	64033966	64034024	64033786	64033876	64034656	64034743	-0.11700	0.00020	excluded	K562	WDR3
SE	PLCB3	ENSG00000149782.7	chr11	+	64031492	64031584	64031162	64031267	64032422	64032576	-0.22400	0.00018	excluded	HepG2	U2AF1
RI	PLCB3	ENSG00000149782.7	chr11	+	64031033	64031267	64031033	64031069	64031162	64031267	0.16900	0.00000	included	K562	UTP18

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLCB3

General Information

Functions

Localization

Domains (AlphaFold: PLCB3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLCB3 is not avaliable on ENCORE database.

21 proteins are bound to PLCB3 RNA:

eCLIP assay for PLCB3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLCB3 is not available on ENCORE database.

92 RBPs can affect the gene expression of PLCB3 :

The Knockdown/knockout RNA-Seq assay for PLCB3 is not available on ENCORE database.

3 RBPs can affect the splicing of PLCB3 :

The Knockdown/knockout RNA-Seq assay for PLCB3 is not avaliable on ENCORE database.