PEX3

General Information

Gene Name : PEX3
Gene ID : ENSG00000034693.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PEX3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PEX3	ENSG00000034693.14	22.21	19.55	20.88	ENCSR000AEF
HepG2	PEX3	ENSG00000034693.14	16.23	25.07	20.65	ENCSR985KAT
K562	PEX3	ENSG00000034693.14	15.00	17.85	16.43	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PEX3 is not avaliable on ENCORE database.

Proteins bound to RNA

PEX3 RNA is bound by 3 proteins.

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eCLIP assay for PEX3 is not avaliable on ENCORE database.

3 proteins are bound to PEX3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	143784608	143784683	+	intron-Distal	5.96532	16.13880	HepG2	QKI
chr6	143784563	143784608	+	intron-Distal	4.77448	6.23638	HepG2	QKI
chr6	143798831	143798885	+	intron-Distal	4.77859	4.85866	HepG2	QKI
chr6	143791074	143791137	+	intron-Distal	4.27335	4.28663	HepG2	SUGP2
chr6	143796140	143796265	+	intron-Distal	3.71657	4.23286	HepG2	QKI
chr6	143807926	143808053	+	intron-Distal	3.11445	3.51804	HepG2	HNRNPL
chr6	143799840	143799897	+	intron-Distal	3.86355	3.16986	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for PEX3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PEX3 is not available on ENCORE database.
89 RBPs can affect the levels of PEX3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.

89 RBPs can affect the gene expression of PEX3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PEX3	ENSG00000034693.10	244.25660	528.66410	-1.11400	17.23180	15.60660	K562	UPF1
PEX3	ENSG00000034693.10	287.17130	524.68150	-0.86950	10.70400	9.70350	HepG2	TRIM56
PEX3	ENSG00000034693.10	441.54950	713.04400	-0.69140	10.51950	9.52060	HepG2	PUM1
PEX3	ENSG00000034693.10	204.58480	443.84000	-1.11730	10.48930	9.23590	HepG2	CPSF6
PEX3	ENSG00000034693.10	259.50240	475.46630	-0.87360	10.02480	8.87630	HepG2	DNAJC2
PEX3	ENSG00000034693.10	287.11060	520.13370	-0.85730	8.99130	8.18150	HepG2	TIAL1
PEX3	ENSG00000034693.10	366.18660	684.93570	-0.90340	8.98840	8.02870	K562	AQR
PEX3	ENSG00000034693.10	167.42990	356.45160	-1.09010	9.09080	7.25400	K562	PSIP1
PEX3	ENSG00000034693.10	264.37470	464.03260	-0.81160	8.78390	7.04100	K562	BCLAF1
PEX3	ENSG00000034693.10	422.06760	663.21510	-0.65200	7.82510	6.84300	HepG2	SRSF5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.

13 RBPs can affect the splicing of PEX3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.30400	0.00000	0.00009	excluded	HepG2	U2AF2
SE	PEX3	ENSG00000034693.10	chr6	+	143793296	143793465	143792693	143792748	143795922	143795993	-0.28600	0.00000	0.00002	excluded	K562	PUS1
SE	PEX3	ENSG00000034693.10	chr6	+	143793296	143793465	143792693	143792748	143795922	143795993	-0.47300	0.00000	0.00000	excluded	K562	U2AF1
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.12700	0.00000	0.00012	excluded	HepG2	HNRNPL
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.24100	0.00000	0.00002	excluded	K562	HNRNPU
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.28900	0.00000	0.00005	excluded	K562	RBM15
SE	PEX3	ENSG00000034693.10	chr6	+	143793296	143793465	143792693	143792748	143795922	143795993	-0.31700	0.00000	0.00001	excluded	K562	RBM15
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.21800	0.00001	0.00097	excluded	K562	AKAP8L
A3SS	PEX3	ENSG00000034693.10	chr6	+	143780201	143780353	143780221	143780353	143772116	143772252	0.07900	0.00013	0.00111	longer	K562	AQR
SE	PEX3	ENSG00000034693.10	chr6	+	143806288	143806385	143800212	143800335	143810279	143811147	-0.09100	0.00025	0.04249	excluded	K562	ZC3H8

Showing 1 to 10 of 24 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PEX3

General Information

Functions

Localization

Domains (AlphaFold: PEX3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PEX3 is not avaliable on ENCORE database.

3 proteins are bound to PEX3 RNA:

eCLIP assay for PEX3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.

89 RBPs can affect the gene expression of PEX3 :

The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.

13 RBPs can affect the splicing of PEX3 :

The Knockdown/knockout RNA-Seq assay for PEX3 is not avaliable on ENCORE database.