NAB2

General Information

Gene Name : NAB2
Gene ID : ENSG00000166886.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NAB2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NAB2	ENSG00000166886.12	5.00	11.58	8.29	ENCSR000AEF
HepG2	NAB2	ENSG00000166886.12	11.73	7.74	9.73	ENCSR985KAT
K562	NAB2	ENSG00000166886.12	21.81	13.75	17.78	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NAB2 is not avaliable on ENCORE database.

Proteins bound to RNA

NAB2 RNA is bound by 14 proteins.

CanvasJS.com

eCLIP assay for NAB2 is not avaliable on ENCORE database.

14 proteins are bound to NAB2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	57484877	57484941	+	CDS,intron-Distal,intron-Proximal	5.19208	19.91334	K562	AQR
chr12	57486332	57486408	+	CDS,intron-Distal,intron-Proximal	5.26292	15.13298	HepG2	PRPF8
chr12	57483198	57483322	+	intron-Distal,intron-Proximal	5.16736	12.60993	K562	AQR
chr12	57489068	57489220	+	3'-UTR	3.75355	6.89197	K562	PUM2
chr12	57485528	57485613	+	CDS	5.58036	6.68817	HepG2	EFTUD2
chr12	57484851	57484936	+	CDS,intron-Distal,intron-Proximal	4.30548	6.49379	HepG2	AQR
chr12	57486200	57486228	+	intron-Distal,intron-Proximal	4.70854	6.12902	HepG2	SF3B4
chr12	57486621	57486678	+	intron-Proximal	4.74651	6.12902	HepG2	SF3B4
chr12	57482879	57482951	+	5'-UTR	4.82763	6.02367	K562	GTF2F1
chr12	57483209	57483283	+	intron-Distal,intron-Proximal	5.04652	5.58015	HepG2	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 25 entries

eCLIP assay for NAB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NAB2 is not available on ENCORE database.
98 RBPs can affect the levels of NAB2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NAB2 is not available on ENCORE database.

98 RBPs can affect the gene expression of NAB2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NAB2	ENSG00000166886.8	189.95560	684.78300	-1.85000	29.86700	27.36920	K562	PCBP3
NAB2	ENSG00000166886.8	173.21300	525.25270	-1.60050	25.71290	23.49000	K562	POLR2G
NAB2	ENSG00000166886.8	850.81710	238.54790	1.83450	21.51210	19.42490	HepG2	CNOT7
NAB2	ENSG00000166886.8	578.11340	232.59770	1.31340	18.74000	16.33400	K562	RBM22
NAB2	ENSG00000166886.8	795.33130	466.50120	0.76960	14.70150	13.56140	HepG2	PUM1
NAB2	ENSG00000166886.8	992.66230	442.93650	1.16410	14.33750	13.07310	HepG2	DDX6
NAB2	ENSG00000166886.8	556.40750	240.70650	1.20880	14.91680	13.01530	K562	TARDBP
NAB2	ENSG00000166886.8	304.28070	569.61020	-0.90460	13.44880	11.97630	K562	NSUN2
NAB2	ENSG00000166886.8	252.94110	509.28340	-1.00970	12.80430	11.94790	HepG2	SRSF1
NAB2	ENSG00000166886.8	462.86110	895.49870	-0.95210	10.55300	8.94750	K562	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NAB2 is not available on ENCORE database.

4 RBPs can affect the splicing of NAB2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NAB2	ENSG00000166886.8	chr12	+	57487189	57487381	57486845	57486978	57488394	57489259	-0.41600	0.00004	0.00500	excluded	HepG2	SRSF9
SE	NAB2	ENSG00000166886.8	chr12	+	57487189	57487381	57486845	57486978	57488394	57489259	-0.28500	0.00028	0.02296	excluded	HepG2	RBM22
SE	NAB2	ENSG00000166886.8	chr12	+	57487189	57487381	57486845	57486978	57488394	57489259	-0.23900	0.00146	0.08336	excluded	K562	HNRNPL
SE	NAB2	ENSG00000166886.8	chr12	+	57487189	57487381	57486845	57486978	57488394	57489259	-0.27400	0.00607	0.08814	excluded	HepG2	U2AF1

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NAB2

General Information

Functions

Localization

Domains (AlphaFold: NAB2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NAB2 is not avaliable on ENCORE database.

14 proteins are bound to NAB2 RNA:

eCLIP assay for NAB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NAB2 is not available on ENCORE database.

98 RBPs can affect the gene expression of NAB2 :

The Knockdown/knockout RNA-Seq assay for NAB2 is not available on ENCORE database.

4 RBPs can affect the splicing of NAB2 :

The Knockdown/knockout RNA-Seq assay for NAB2 is not avaliable on ENCORE database.