MTMR1

General Information

Gene Name : MTMR1
Gene ID : ENSG00000063601.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTMR1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTMR1	ENSG00000063601.16	25.55	21.93	23.74	ENCSR000AEF
HepG2	MTMR1	ENSG00000063601.16	8.41	10.83	9.62	ENCSR985KAT
K562	MTMR1	ENSG00000063601.16	16.33	17.35	16.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTMR1 is not avaliable on ENCORE database.

Proteins bound to RNA

MTMR1 RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for MTMR1 is not avaliable on ENCORE database.

9 proteins are bound to MTMR1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	149933050	149933133	+	3'-UTR	5.27196	8.40676	K562	UPF1
chrX	149896163	149896237	+	CDS	4.07375	8.34773	K562	YBX3
chrX	149932699	149932766	+	3'-UTR,intron-Distal	4.41385	8.17454	K562	UPF1
chrX	149932962	149933092	+	3'-UTR,intron-Proximal	4.02484	7.91182	K562	FAM120A
chrX	149882558	149882684	+	intron-Distal	4.09359	7.26586	K562	KHSRP
chrX	149886878	149886975	+	intron-Distal	4.78494	7.17304	K562	KHSRP
chrX	149886787	149886878	+	intron-Distal	3.53809	6.80241	K562	KHSRP
chrX	149873650	149873785	+	intron-Distal	4.33901	5.16344	K562	SAFB2
chrX	149869308	149869387	+	intron-Distal	4.48593	5.08344	K562	TARDBP
chrX	149876667	149876738	+	intron-Distal	4.23306	4.96658	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 17 entries

eCLIP assay for MTMR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTMR1 is not available on ENCORE database.
51 RBPs can affect the levels of MTMR1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.

51 RBPs can affect the gene expression of MTMR1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTMR1	ENSG00000063601.12	180.95440	414.71690	-1.19650	12.74400	11.59010	HepG2	PUF60
MTMR1	ENSG00000063601.12	1166.19640	1936.87370	-0.73190	9.65180	8.10580	K562	PUF60
MTMR1	ENSG00000063601.12	761.97010	1137.73540	-0.57840	8.82740	7.42780	K562	SF3A3
MTMR1	ENSG00000063601.12	584.47620	358.91680	0.70340	8.06310	7.35260	HepG2	SRSF1
MTMR1	ENSG00000063601.12	735.87340	486.18750	0.59780	6.74090	6.01640	HepG2	RBM22
MTMR1	ENSG00000063601.12	425.23280	694.07860	-0.70680	5.40200	4.25720	K562	RPS19
MTMR1	ENSG00000063601.12	527.99140	336.47330	0.64990	4.65480	3.85070	HepG2	U2AF1
MTMR1	ENSG00000063601.12	366.57430	219.06840	0.74260	5.01460	3.76080	HepG2	SERBP1
MTMR1	ENSG00000063601.12	642.30530	393.33980	0.70740	4.73020	3.74620	HepG2	FIP1L1
MTMR1	ENSG00000063601.12	1054.92730	767.24260	0.45930	4.56980	3.66560	K562	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.

8 RBPs can affect the splicing of MTMR1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MTMR1	ENSG00000063601.12	chrX	+	149880813	149880837	149867667	149867773	149887096	149887172	0.42200	0.00000	0.00002	included	K562	PTBP1
SE	MTMR1	ENSG00000063601.12	chrX	+	149880813	149880837	149867667	149867773	149887096	149887172	-0.30700	0.00003	0.00211	excluded	K562	FXR1
SE	MTMR1	ENSG00000063601.12	chrX	+	149880813	149880837	149867667	149867773	149887096	149887172	-0.31100	0.00007	0.03992	excluded	K562	NCBP2
SE	MTMR1	ENSG00000063601.12	chrX	+	149880813	149880837	149867667	149867773	149887096	149887172	0.19200	0.00032	0.07589	included	K562	PUM1
SE	MTMR1	ENSG00000063601.12	chrX	+	149919501	149919712	149919201	149919315	149924160	149924337	0.17700	0.00061	0.02576	included	K562	HNRNPU
SE	MTMR1	ENSG00000063601.12	chrX	+	149880813	149880837	149867667	149867773	149887096	149887172	0.23000	0.00110	0.02256	included	K562	SRSF1
SE	MTMR1	ENSG00000063601.12	chrX	+	149919501	149919712	149919201	149919315	149924160	149924337	0.28900	0.00128	0.03299	included	HepG2	HNRNPK
A3SS	MTMR1	ENSG00000063601.12	chrX	+	149924129	149924337	149924160	149924337	149919201	149919315	0.05900	0.01600	0.07898	longer	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTMR1

General Information

Functions

Localization

Domains (AlphaFold: MTMR1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTMR1 is not avaliable on ENCORE database.

9 proteins are bound to MTMR1 RNA:

eCLIP assay for MTMR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.

51 RBPs can affect the gene expression of MTMR1 :

The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.

8 RBPs can affect the splicing of MTMR1 :

The Knockdown/knockout RNA-Seq assay for MTMR1 is not avaliable on ENCORE database.