FBXO18

General Information

Gene Name : FBXO18
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FBXO18)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FBXO18 is not avaliable on ENCORE database.

Proteins bound to RNA

FBXO18 RNA is bound by 40 proteins.

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eCLIP assay for FBXO18 is not avaliable on ENCORE database.

40 proteins are bound to FBXO18 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	5952851	5952924	+	5'-UTR,CDS,intron-Proximal	5.16070	22.38149	K562	AQR
chr10	5951285	5951313	+	intron-Proximal	5.78459	19.62251	K562	AQR
chr10	5944995	5945114	+	5'-UTR,CDS,intron-Distal	4.66422	16.40314	K562	DDX3X
chr10	5934108	5934193	+	intron-Distal	4.96575	14.45079	HepG2	SUGP2
chr10	5951259	5951285	+	intron-Proximal	4.99743	14.41880	K562	AQR
chr10	5951255	5951304	+	5'-UTR,CDS,intron-Proximal	4.46309	13.26139	HepG2	PRPF8
chr10	5951257	5951259	+	intron-Proximal	4.82401	12.86643	K562	AQR
chr10	5958689	5958761	+	intron-Distal	6.55562	12.75970	K562	EFTUD2
chr10	5932219	5932315	+	5'-UTR,CDS,intron-Distal,intron-Proximal	5.02358	12.62211	K562	DDX3X
chr10	5932480	5932584	+	intron-Distal	3.83963	11.96916	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 134 entries

eCLIP assay for FBXO18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FBXO18 is not available on ENCORE database.
39 RBPs can affect the levels of FBXO18.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FBXO18 is not available on ENCORE database.

39 RBPs can affect the gene expression of FBXO18 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FBXO18	ENSG00000134452.15	791.66780	1309.08770	-0.72560	12.85890	11.78380	HepG2	TAF15
FBXO18	ENSG00000134452.15	2391.84960	1620.17520	0.56190	11.47660	10.33020	K562	FXR1
FBXO18	ENSG00000134452.15	1028.00780	1456.30590	-0.50250	8.13400	7.42210	HepG2	SRSF1
FBXO18	ENSG00000134452.15	1456.85490	909.72700	0.67930	7.34120	5.61190	K562	RPS3
FBXO18	ENSG00000134452.15	3703.23300	2928.62560	0.33850	6.13600	5.21900	K562	DDX47
FBXO18	ENSG00000134452.15	1158.78630	1789.34610	-0.62680	6.31390	4.82380	K562	HNRNPM
FBXO18	ENSG00000134452.15	725.15470	1097.97300	-0.59850	7.05060	4.81850	K562	RBM25
FBXO18	ENSG00000134452.15	978.25490	1280.28490	-0.38820	5.59620	4.77580	HepG2	PUS1
FBXO18	ENSG00000134452.15	706.25870	1048.35170	-0.56990	5.31480	4.39080	HepG2	CPSF6
FBXO18	ENSG00000134452.15	760.05710	1002.47950	-0.39940	5.09720	4.23300	HepG2	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 45 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FBXO18 is not available on ENCORE database.

18 RBPs can affect the splicing of FBXO18 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	FBXO18	ENSG00000134452.15	chr10	+	5955709	5955802	5952900	5953091	5956140	5956232	-0.13300	0.00014	excluded	HepG2	U2AF1
SE	FBXO18	ENSG00000134452.15	chr10	+	5966713	5966764	5966273	5966471	5967329	5967455	0.17300	0.00007	included	HepG2	HNRNPK
SE	FBXO18	ENSG00000134452.15	chr10	+	5965583	5965659	5963410	5963532	5966273	5966471	-0.11400	0.00000	excluded	K562	PUS1
SE	FBXO18	ENSG00000134452.15	chr10	+	5960304	5960441	5959552	5959639	5963220	5963320	-0.23600	0.00001	excluded	K562	U2AF1
SE	FBXO18	ENSG00000134452.15	chr10	+	5965583	5965659	5963410	5963532	5966273	5966471	-0.08900	0.00032	excluded	HepG2	SF3A3
SE	FBXO18	ENSG00000134452.15	chr10	+	5965583	5965659	5963410	5963532	5966273	5966471	-0.08000	0.00011	excluded	K562	RBM15
SE	FBXO18	ENSG00000134452.15	chr10	+	5965583	5965659	5963410	5963532	5966273	5966471	-0.09500	0.00001	excluded	K562	AGGF1
A3SS	FBXO18	ENSG00000134452.15	chr10	+	5979047	5979091	5979072	5979091	5978418	5978550	0.12900	0.00000	longer	K562	AQR
A5SS	FBXO18	ENSG00000134452.15	chr10	+	5959552	5959698	5959552	5959639	5960304	5960441	0.13700	0.00000	longer	K562	AQR
A5SS	FBXO18	ENSG00000134452.15	chr10	+	5965583	5965829	5965583	5965659	5966273	5966471	0.06000	0.00005	longer	K562	RBM15

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FBXO18

General Information

Functions

Localization

Domains (AlphaFold: FBXO18)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FBXO18 is not avaliable on ENCORE database.

40 proteins are bound to FBXO18 RNA:

eCLIP assay for FBXO18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FBXO18 is not available on ENCORE database.

39 RBPs can affect the gene expression of FBXO18 :

The Knockdown/knockout RNA-Seq assay for FBXO18 is not available on ENCORE database.

18 RBPs can affect the splicing of FBXO18 :

The Knockdown/knockout RNA-Seq assay for FBXO18 is not avaliable on ENCORE database.