CAMSAP1

General Information

Gene Name : CAMSAP1
Gene ID : ENSG00000130559.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CAMSAP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CAMSAP1	ENSG00000130559.18	5.06	6.87	5.96	ENCSR000AEF
HepG2	CAMSAP1	ENSG00000130559.18	10.61	6.93	8.77	ENCSR985KAT
K562	CAMSAP1	ENSG00000130559.18	14.20	10.03	12.11	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.

Proteins bound to RNA

CAMSAP1 RNA is bound by 36 proteins.

CanvasJS.com

eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.

36 proteins are bound to CAMSAP1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	138774758	138774923	-	CDS,intron-Distal,intron-Proximal	5.03894	24.41134	K562	NOLC1
chr9	138701568	138701652	-	3'-UTR,intron-Distal	6.78404	22.62757	K562	PUM2
chr9	138785986	138786085	-	intron-Distal	5.15138	19.15951	K562	HNRNPM
chr9	138782004	138782165	-	intron-Distal	5.81146	16.19652	K562	TARDBP
chr9	138785021	138785067	-	intron-Distal	6.37018	14.59132	K562	PTBP1
chr9	138714572	138714724	-	CDS,intron-Distal	4.98027	14.01494	K562	UCHL5
chr9	138785941	138786105	-	intron-Distal	5.81936	13.97739	HepG2	SUGP2
chr9	138774029	138774110	-	intron-Distal	5.46319	13.21172	K562	LIN28B
chr9	138773604	138773689	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.07707	12.70303	K562	AQR
chr9	138774822	138774844	-	CDS,intron-Distal,intron-Proximal	3.12343	12.20084	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 134 entries

eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CAMSAP1 is not available on ENCORE database.
53 RBPs can affect the levels of CAMSAP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.

53 RBPs can affect the gene expression of CAMSAP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CAMSAP1	ENSG00000130559.14	1419.09920	710.37390	0.99820	21.51900	19.24820	K562	U2AF2
CAMSAP1	ENSG00000130559.14	2917.64310	1860.50830	0.64900	17.89030	16.36160	K562	DDX47
CAMSAP1	ENSG00000130559.14	2680.53260	1888.54620	0.50510	11.87170	10.78780	K562	AGGF1
CAMSAP1	ENSG00000130559.14	1179.69900	1748.97880	-0.56810	12.05160	10.68370	K562	UPF1
CAMSAP1	ENSG00000130559.14	1428.97210	813.37550	0.81290	11.12250	9.83960	HepG2	U2AF1
CAMSAP1	ENSG00000130559.14	862.61220	498.38570	0.79130	9.94540	8.86860	HepG2	RPS19
CAMSAP1	ENSG00000130559.14	1301.10020	687.64410	0.91990	11.15480	8.76640	K562	U2AF1
CAMSAP1	ENSG00000130559.14	1279.39280	815.29110	0.65000	9.77070	8.54990	HepG2	PUM2
CAMSAP1	ENSG00000130559.14	1239.51010	863.03820	0.52220	9.38740	8.35740	HepG2	SUCLG1
CAMSAP1	ENSG00000130559.14	1141.30720	815.90050	0.48410	8.53530	7.61410	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 63 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.

5 RBPs can affect the splicing of CAMSAP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CAMSAP1	ENSG00000130559.14	chr9	-	138754312	138754454			138742167	138742307	138758301	138758382	-0.42500	0.00032	0.07397	excluded	K562	WDR43
SE	CAMSAP1	ENSG00000130559.14	chr9	-	138758301	138758382			138719252	138719430	138773478	138773640	-0.31000	0.00361	0.04838	excluded	K562	PUS1
MXE	CAMSAP1	ENSG00000130559.14	chr9	-	138741982	138742010	138758301	138758382	138719252	138719430	138773478	138773640	-0.25700	0.00404	0.03006	2included	K562	AQR
MXE	CAMSAP1	ENSG00000130559.14	chr9	-	138754312	138754454	138758301	138758382	138742167	138742307	138773478	138773640	0.27500	0.00466	0.06136	1included	HepG2	HNRNPUL1
MXE	CAMSAP1	ENSG00000130559.14	chr9	-	138741982	138742079	138754312	138754454	138719252	138719430	138758301	138758382	-0.08700	0.00499	0.03040	2included	HepG2	U2AF2

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CAMSAP1

General Information

Functions

Localization

Domains (AlphaFold: CAMSAP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.

36 proteins are bound to CAMSAP1 RNA:

eCLIP assay for CAMSAP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.

53 RBPs can affect the gene expression of CAMSAP1 :

The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not available on ENCORE database.

5 RBPs can affect the splicing of CAMSAP1 :

The Knockdown/knockout RNA-Seq assay for CAMSAP1 is not avaliable on ENCORE database.