B9D1

General Information

Gene Name : B9D1
Gene ID : ENSG00000108641.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: B9D1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	B9D1	ENSG00000108641.15	3.12	5.92	4.52	ENCSR000AEF
HepG2	B9D1	ENSG00000108641.15	34.73	19.03	26.88	ENCSR985KAT
K562	B9D1	ENSG00000108641.15	10.35	12.68	11.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for B9D1 is not avaliable on ENCORE database.

Proteins bound to RNA

B9D1 RNA is bound by 5 proteins.

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eCLIP assay for B9D1 is not avaliable on ENCORE database.

5 proteins are bound to B9D1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	19247896	19247974	-	intron-Distal	7.04171	36.60403	HepG2	DGCR8
chr17	19247825	19247860	-	intron-Distal	6.93209	28.76486	K562	DGCR8
chr17	19247839	19247864	-	intron-Distal	7.13677	27.42832	HepG2	DGCR8
chr17	19247880	19248003	-	intron-Distal	4.83685	23.26145	HepG2	DROSHA
chr17	19247823	19247839	-	intron-Distal	6.85725	23.02319	HepG2	DGCR8
chr17	19247615	19247708	-	intron-Distal	6.26749	19.48262	HepG2	DGCR8
chr17	19247708	19247770	-	intron-Distal	6.17819	16.81710	HepG2	DGCR8
chr17	19248304	19248358	-	intron-Distal	5.74923	14.12035	HepG2	DGCR8
chr17	19247444	19247514	-	intron-Distal	5.53889	12.86946	HepG2	DGCR8
chr17	19248225	19248378	-	intron-Distal	4.94616	12.08402	HepG2	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 31 entries

eCLIP assay for B9D1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for B9D1 is not available on ENCORE database.
48 RBPs can affect the levels of B9D1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for B9D1 is not available on ENCORE database.

48 RBPs can affect the gene expression of B9D1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
B9D1	ENSG00000108641.10	72.99150	271.98710	-1.89770	21.96380	20.90330	HepG2	SRFBP1
B9D1	ENSG00000108641.10	69.35120	225.15100	-1.69890	11.02480	9.96810	K562	AQR
B9D1	ENSG00000108641.10	103.84650	240.81060	-1.21340	8.60460	7.80850	HepG2	RBM22
B9D1	ENSG00000108641.10	9.93630	60.76730	-2.61250	8.42920	7.01310	K562	U2AF2
B9D1	ENSG00000108641.10	421.20510	202.83990	1.05410	7.46570	6.63630	HepG2	AKAP1
B9D1	ENSG00000108641.10	93.87000	203.52650	-1.11650	6.65750	5.78640	HepG2	PUF60
B9D1	ENSG00000108641.10	47.94780	128.96180	-1.42740	6.57990	5.51340	HepG2	SF3A3
B9D1	ENSG00000108641.10	135.04260	250.94250	-0.89390	6.25700	5.29150	HepG2	AUH
B9D1	ENSG00000108641.10	196.63130	100.34680	0.97040	6.16300	5.26010	HepG2	SAFB2
B9D1	ENSG00000108641.10	88.56520	194.28100	-1.13330	5.86180	4.98340	HepG2	DDX3X
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for B9D1 is not available on ENCORE database.

7 RBPs can affect the splicing of B9D1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	-0.28900	0.00005	0.00083	excluded	K562	AKAP8L
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	0.31600	0.00008	0.00371	included	HepG2	KHSRP
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	0.29200	0.00059	0.01384	included	HepG2	FUBP3
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	0.28500	0.00082	0.01140	included	HepG2	HNRNPK
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	-0.24300	0.00545	0.03342	excluded	K562	PUS1
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	-0.24400	0.00946	0.08030	excluded	K562	RBM15
A3SS	B9D1	ENSG00000108641.10	chr17	-	19246482	19246808	19246482	19246774	19247102	19247170	0.21800	0.01539	0.07643	longer	K562	AQR
RI	B9D1	ENSG00000108641.10	chr17	-	19246482	19247170	19246482	19246774	19247102	19247170	0.22600	0.01628	0.08213	included	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

B9D1

General Information

Functions

Localization

Domains (AlphaFold: B9D1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for B9D1 is not avaliable on ENCORE database.

5 proteins are bound to B9D1 RNA:

eCLIP assay for B9D1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for B9D1 is not available on ENCORE database.

48 RBPs can affect the gene expression of B9D1 :

The Knockdown/knockout RNA-Seq assay for B9D1 is not available on ENCORE database.

7 RBPs can affect the splicing of B9D1 :

The Knockdown/knockout RNA-Seq assay for B9D1 is not avaliable on ENCORE database.