TIMM44

General Information

Gene Name : TIMM44
Gene ID : ENSG00000104980.7
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIMM44)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIMM44	ENSG00000104980.7	17.04	29.18	23.11	ENCSR000AEF
HepG2	TIMM44	ENSG00000104980.7	42.92	34.30	38.61	ENCSR985KAT
K562	TIMM44	ENSG00000104980.7	67.04	60.03	63.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIMM44 is not avaliable on ENCORE database.

Proteins bound to RNA

TIMM44 RNA is bound by 29 proteins.

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eCLIP assay for TIMM44 is not avaliable on ENCORE database.

29 proteins are bound to TIMM44 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	7998459	7998556	-	intron-Distal,intron-Proximal	5.48026	36.70965	K562	SF3B4
chr19	7998536	7998714	-	intron-Distal,intron-Proximal	3.68062	18.85322	K562	EFTUD2
chr19	7998302	7998403	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.40103	18.19115	HepG2	PRPF8
chr19	7997560	7997613	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.09832	17.59411	K562	SRSF1
chr19	7992762	7992916	-	intron-Distal,intron-Proximal	5.07701	17.27649	HepG2	EFTUD2
chr19	7998712	7998734	-	intron-Distal,intron-Proximal	6.11624	16.41790	HepG2	PRPF8
chr19	7997460	7997513	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.30358	16.33109	K562	AQR
chr19	7998739	7998788	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.57265	15.92432	K562	UCHL5
chr19	7998734	7998749	-	intron-Distal,intron-Proximal	5.12561	14.91014	HepG2	PRPF8
chr19	7997724	7997819	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.86984	14.37344	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 115 entries

eCLIP assay for TIMM44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIMM44 is not available on ENCORE database.
92 RBPs can affect the levels of TIMM44.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIMM44 is not available on ENCORE database.

92 RBPs can affect the gene expression of TIMM44 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIMM44	ENSG00000104980.3	501.35700	1037.32340	-1.04900	24.77590	23.09640	HepG2	AUH
TIMM44	ENSG00000104980.3	1147.96930	661.31570	0.79560	16.62340	15.33820	HepG2	UTP3
TIMM44	ENSG00000104980.3	3206.18380	2211.51780	0.53570	13.38910	12.06710	K562	DDX47
TIMM44	ENSG00000104980.3	591.84860	333.55190	0.82720	11.64490	10.60430	HepG2	TRIM56
TIMM44	ENSG00000104980.3	539.04440	303.45420	0.82880	10.18110	8.81580	HepG2	PPIL4
TIMM44	ENSG00000104980.3	579.89280	330.56280	0.81080	9.21770	8.39850	HepG2	TIAL1
TIMM44	ENSG00000104980.3	1590.17900	1013.44450	0.64980	9.83800	8.17790	K562	TIA1
TIMM44	ENSG00000104980.3	1962.83000	2783.49050	-0.50400	8.69900	7.67370	K562	RBM15
TIMM44	ENSG00000104980.3	1097.62320	1837.81420	-0.74360	8.78200	7.30310	K562	PCBP3
TIMM44	ENSG00000104980.3	881.97160	612.98130	0.52480	8.10810	7.20330	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIMM44 is not available on ENCORE database.

8 RBPs can affect the splicing of TIMM44 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TIMM44	ENSG00000104980.3	chr19	-	7999949	8000051			7998973	7999123	8002911	8003082	-0.09000	0.00000	0.00005	excluded	K562	AKAP8L
SE	TIMM44	ENSG00000104980.3	chr19	-	7997511	7997636			7996022	7996073	7997724	7997817	-0.10800	0.00000	0.00000	excluded	K562	AQR
SE	TIMM44	ENSG00000104980.3	chr19	-	7999949	8000051			7998973	7999123	8002911	8003082	-0.08900	0.00000	0.00006	excluded	K562	PUS1
A3SS	TIMM44	ENSG00000104980.3	chr19	-	7997724	7997904			7997724	7997817	7998369	7998427	0.09200	0.00000	0.00000	longer	K562	AQR
A3SS	TIMM44	ENSG00000104980.3	chr19	-	7993007	7993243			7993007	7993051	7996022	7996073	0.19500	0.00000	0.00000	longer	K562	AQR
A3SS	TIMM44	ENSG00000104980.3	chr19	-	8005986	8006129			8005986	8006082	8008491	8008552	0.29300	0.00000	0.00000	longer	K562	AQR
A3SS	TIMM44	ENSG00000104980.3	chr19	-	7992549	7992698			7992549	7992652	7992961	7993021	0.15300	0.00000	0.00000	longer	K562	AQR
A3SS	TIMM44	ENSG00000104980.3	chr19	-	7999949	8000138			7999949	8000030	8002911	8003082	0.08200	0.00000	0.00000	longer	K562	AQR
MXE	TIMM44	ENSG00000104980.3	chr19	-	7992541	7992652	7996022	7996073	7991620	7992191	7997511	7997636	0.20400	0.00001	0.00043	1included	K562	DROSHA
A3SS	TIMM44	ENSG00000104980.3	chr19	-	7998973	7999126			7998973	7999123	7999949	8000030	0.08700	0.00003	0.00026	longer	K562	AQR

Showing 1 to 10 of 21 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIMM44

General Information

Functions

Localization

Domains (AlphaFold: TIMM44)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIMM44 is not avaliable on ENCORE database.

29 proteins are bound to TIMM44 RNA:

eCLIP assay for TIMM44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIMM44 is not available on ENCORE database.

92 RBPs can affect the gene expression of TIMM44 :

The Knockdown/knockout RNA-Seq assay for TIMM44 is not available on ENCORE database.

8 RBPs can affect the splicing of TIMM44 :

The Knockdown/knockout RNA-Seq assay for TIMM44 is not avaliable on ENCORE database.