SON

General Information

Gene Name : SON
Gene ID : ENSG00000159140.19
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SON)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SON	ENSG00000159140.19	193.94	158.20	176.07	ENCSR000AEF
HepG2	SON	ENSG00000159140.19	87.97	155.98	121.97	ENCSR985KAT
K562	SON	ENSG00000159140.19	125.14	136.58	130.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SON is not avaliable on ENCORE database.

Proteins bound to RNA

SON RNA is bound by 62 proteins.

CanvasJS.com

eCLIP assay for SON is not avaliable on ENCORE database.

62 proteins are bound to SON RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	34931325	34931346	+	3'-UTR,intron-Distal	5.41549	400.00000	K562	CPSF6
chr21	34931285	34931325	+	3'-UTR,intron-Distal	5.82807	400.00000	K562	CPSF6
chr21	34931190	34931250	+	3'-UTR,intron-Distal	9.10018	145.24387	K562	CPSF6
chr21	34923419	34923441	+	CDS,intron-Distal	6.21641	74.64009	K562	RBM15
chr21	34931250	34931268	+	3'-UTR,intron-Distal	8.10672	72.43269	K562	CPSF6
chr21	34923408	34923419	+	CDS,intron-Distal	6.25969	59.64503	K562	RBM15
chr21	34922785	34922853	+	CDS,intron-Distal	7.48568	58.65799	K562	RBM15
chr21	34923455	34923498	+	CDS,intron-Distal	6.36463	53.56959	K562	RBM15
chr21	34915488	34915580	+	intron-Distal,intron-Proximal	5.55243	46.81262	K562	PRPF8
chr21	34942006	34942109	+	3'-UTR,intron-Distal	4.51506	43.90900	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 513 entries

eCLIP assay for SON is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SON is not available on ENCORE database.
88 RBPs can affect the levels of SON.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SON is not available on ENCORE database.

88 RBPs can affect the gene expression of SON :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SON	ENSG00000159140.13	6297.01170	10946.01630	-0.79770	46.67540	45.27610	HepG2	SRFBP1
SON	ENSG00000159140.13	10785.21230	6488.70420	0.73300	38.90930	37.58500	HepG2	SRSF1
SON	ENSG00000159140.13	36386.22050	16553.94130	1.13610	35.39070	33.50050	K562	AQR
SON	ENSG00000159140.13	4054.13310	5942.01050	-0.55160	25.31590	23.37650	HepG2	ILF2
SON	ENSG00000159140.13	10092.00520	17624.27190	-0.80440	16.79430	14.95390	K562	HSPD1
SON	ENSG00000159140.13	10711.59580	6233.73600	0.78090	15.24920	13.72720	HepG2	U2AF1
SON	ENSG00000159140.13	10968.49980	17421.55660	-0.66750	14.89840	13.10500	K562	GRSF1
SON	ENSG00000159140.13	4936.91780	6736.68860	-0.44840	14.46510	12.88440	HepG2	DDX19B
SON	ENSG00000159140.13	3828.04150	5180.46840	-0.43650	13.21390	11.96320	HepG2	SAFB2
SON	ENSG00000159140.13	9440.27330	7282.49340	0.37430	12.64720	11.43260	HepG2	CKAP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 95 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SON is not available on ENCORE database.

19 RBPs can affect the splicing of SON :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.12900	0.00000	included	HepG2	G3BP1
SE	SON	ENSG00000159140.13	chr21	+	34921781	34927697	34918518	34918685	34929461	34929622	-0.10700	0.00000	excluded	K562	SF3B4
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.07600	0.00004	included	HepG2	TBRG4
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941235	34941393	34945613	34945761	0.12400	0.00000	included	K562	AQR
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.11800	0.00191	included	HepG2	LIN28B
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.14200	0.00000	included	HepG2	HNRNPA1
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.13500	0.00000	included	HepG2	MATR3
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.10400	0.00000	included	HepG2	SF3A3
SE	SON	ENSG00000159140.13	chr21	+	34944856	34944936	34941276	34941393	34945613	34945761	0.12000	0.00003	included	HepG2	TIAL1
SE	SON	ENSG00000159140.13	chr21	+	34921781	34927697	34918518	34918685	34929461	34929622	-0.14200	0.00000	excluded	K562	RBM15

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SON

General Information

Functions

Localization

Domains (AlphaFold: SON)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SON is not avaliable on ENCORE database.

62 proteins are bound to SON RNA:

eCLIP assay for SON is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SON is not available on ENCORE database.

88 RBPs can affect the gene expression of SON :

The Knockdown/knockout RNA-Seq assay for SON is not available on ENCORE database.

19 RBPs can affect the splicing of SON :

The Knockdown/knockout RNA-Seq assay for SON is not avaliable on ENCORE database.