SOAT2

General Information

Gene Name : SOAT2
Gene ID : ENSG00000167780.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SOAT2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SOAT2	ENSG00000167780.11	0.27	0.53	0.40	ENCSR000AEF
HepG2	SOAT2	ENSG00000167780.11	26.94	15.23	21.09	ENCSR985KAT
K562	SOAT2	ENSG00000167780.11	0.03	0.08	0.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SOAT2 is not avaliable on ENCORE database.

Proteins bound to RNA

SOAT2 RNA is bound by 12 proteins.

CanvasJS.com

eCLIP assay for SOAT2 is not avaliable on ENCORE database.

12 proteins are bound to SOAT2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	53513257	53513396	+	intron-Distal	6.15215	31.88901	HepG2	QKI
chr12	53512767	53512895	+	intron-Distal,intron-Proximal	3.61457	17.30949	HepG2	EFTUD2
chr12	53498890	53498930	+	CDS,intron-Proximal	3.50233	9.04641	HepG2	PPIG
chr12	53497379	53497440	+	CDS	3.19598	8.46940	HepG2	RPS3
chr12	53509897	53509949	+	CDS	3.61964	7.38586	HepG2	PPIG
chr12	53497379	53497442	+	CDS	3.25136	6.88189	HepG2	DDX3X
chr12	53517944	53518162	+	3'-UTR,polyA_site	4.97222	6.52213	HepG2	UPF1
chr12	53515157	53515184	+	3'-UTR,CDS	3.31458	6.47139	HepG2	PPIG
chr12	53511980	53512154	+	CDS,intron-Distal,intron-Proximal	4.13071	6.33671	HepG2	HNRNPK
chr12	53497313	53497379	+	5'-UTR,CDS	3.21646	5.83470	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for SOAT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SOAT2 is not available on ENCORE database.
128 RBPs can affect the levels of SOAT2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SOAT2 is not available on ENCORE database.

128 RBPs can affect the gene expression of SOAT2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SOAT2	ENSG00000167780.7	92.43450	1036.95420	-3.48780	153.67930	151.42040	HepG2	SRFBP1
SOAT2	ENSG00000167780.7	123.16410	1913.10900	-3.95730	129.45370	126.85710	HepG2	AKAP1
SOAT2	ENSG00000167780.7	354.02850	1853.12660	-2.38800	128.91360	126.70390	HepG2	NELFE
SOAT2	ENSG00000167780.7	3361.70570	916.82410	1.87440	76.85930	74.33350	HepG2	PUF60
SOAT2	ENSG00000167780.7	437.63650	1626.45900	-1.89390	76.44440	74.02230	HepG2	TAF15
SOAT2	ENSG00000167780.7	540.50690	1725.93180	-1.67500	72.86550	70.63200	HepG2	RECQL
SOAT2	ENSG00000167780.7	482.86240	1472.13660	-1.60820	67.28670	65.31490	HepG2	SRSF9
SOAT2	ENSG00000167780.7	1311.70670	231.20180	2.50410	67.28610	64.88200	HepG2	HNRNPLL
SOAT2	ENSG00000167780.7	199.43210	804.10730	-2.01150	64.09260	62.14610	HepG2	ACO1
SOAT2	ENSG00000167780.7	2108.16700	968.51100	1.12200	53.58540	51.19110	HepG2	DAZAP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 128 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SOAT2 is not available on ENCORE database.

17 RBPs can affect the splicing of SOAT2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SOAT2	ENSG00000167780.7	chr12	+	53499344	53499404			53498890	53499027	53499690	53499798	0.40700	0.00000	0.00005	included	HepG2	HNRNPK
SE	SOAT2	ENSG00000167780.7	chr12	+	53512673	53512719			53512133	53512218	53512907	53513037	0.09600	0.00000	0.00001	included	HepG2	HNRNPK
SE	SOAT2	ENSG00000167780.7	chr12	+	53499690	53499798			53498890	53499027	53509173	53509438	-0.41000	0.00000	0.00000	excluded	HepG2	HNRNPK
SE	SOAT2	ENSG00000167780.7	chr12	+	53512673	53512719			53512133	53512218	53512907	53513037	0.09600	0.00000	0.00013	included	HepG2	SRSF1
SE	SOAT2	ENSG00000167780.7	chr12	+	53499344	53499404			53498890	53499027	53499690	53499798	-0.31300	0.00000	0.00053	excluded	HepG2	SRSF9
SE	SOAT2	ENSG00000167780.7	chr12	+	53499690	53499798			53498890	53499027	53509173	53509438	-0.18900	0.00003	0.00097	excluded	HepG2	U2AF1
SE	SOAT2	ENSG00000167780.7	chr12	+	53499344	53499404			53498890	53499027	53499690	53499798	0.19600	0.00003	0.00545	included	HepG2	QKI
SE	SOAT2	ENSG00000167780.7	chr12	+	53512673	53512719			53512133	53512218	53512907	53513037	-0.26100	0.00004	0.00278	excluded	HepG2	HNRNPC
MXE	SOAT2	ENSG00000167780.7	chr12	+	53516864	53517000	53517000	53517130	53515086	53515185	53517511	53517657	-0.08700	0.00005	0.00812	2included	HepG2	G3BP1
A5SS	SOAT2	ENSG00000167780.7	chr12	+	53516864	53517108			53516864	53517000	53517511	53517657	0.11700	0.00009	0.02339	longer	HepG2	PRPF8

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SOAT2

General Information

Functions

Localization

Domains (AlphaFold: SOAT2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SOAT2 is not avaliable on ENCORE database.

12 proteins are bound to SOAT2 RNA:

eCLIP assay for SOAT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SOAT2 is not available on ENCORE database.

128 RBPs can affect the gene expression of SOAT2 :

The Knockdown/knockout RNA-Seq assay for SOAT2 is not available on ENCORE database.

17 RBPs can affect the splicing of SOAT2 :

The Knockdown/knockout RNA-Seq assay for SOAT2 is not avaliable on ENCORE database.