RP11-1407O15.2

General Information

Gene Name : RP11-1407O15.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-1407O15.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-1407O15.2 RNA is bound by 17 proteins.

CanvasJS.com

eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.

17 proteins are bound to RP11-1407O15.2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	36357234	36357284	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.09360	28.76148	HepG2	U2AF2
chr17	36358116	36358152	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.19165	23.66170	HepG2	PRPF8
chr17	36358112	36358166	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.81920	19.57559	HepG2	U2AF2
chr17	36358079	36358116	-	intron-Distal,intron-Proximal	6.46319	16.30191	HepG2	PRPF8
chr17	36413224	36413339	-	5'-UTR,intron-Distal,intron-Proximal	5.72426	15.88042	K562	PCBP1
chr17	36350038	36350208	-	intron-Distal	4.95697	15.14933	HepG2	HNRNPK
chr17	36413252	36413344	-	5'-UTR,intron-Distal,intron-Proximal	4.25235	13.84781	HepG2	PCBP2
chr17	36413237	36413335	-	5'-UTR,intron-Distal,intron-Proximal	5.57332	13.65571	HepG2	HNRNPK
chr17	36358844	36358942	-	3'-UTR,CDS,intron-Distal	3.62766	13.50876	HepG2	BCLAF1
chr17	36351901	36351997	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.06787	12.35960	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 33 entries

eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-1407O15.2 is not available on ENCORE database.
97 RBPs can affect the levels of RP11-1407O15.2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.

97 RBPs can affect the gene expression of RP11-1407O15.2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-1407O15.2	ENSG00000174093.6	1018.33770	522.34900	0.96300	12.40530	11.34760	HepG2	TAF15
RP11-1407O15.2	ENSG00000174093.6	453.19240	724.35510	-0.67660	10.48070	9.35930	HepG2	SMN1
RP11-1407O15.2	ENSG00000174093.6	447.39710	739.62410	-0.72520	10.30740	9.26860	HepG2	UTP3
RP11-1407O15.2	ENSG00000174093.6	892.48750	554.29340	0.68710	10.32100	9.24600	HepG2	RECQL
RP11-1407O15.2	ENSG00000174093.6	427.59440	697.46620	-0.70590	10.24430	9.14050	HepG2	HNRNPU
RP11-1407O15.2	ENSG00000174093.6	908.73270	525.61830	0.78970	10.38090	9.13370	HepG2	RBM25
RP11-1407O15.2	ENSG00000174093.6	404.60790	724.23460	-0.83990	10.24770	8.90150	K562	SRSF1
RP11-1407O15.2	ENSG00000174093.6	361.84190	625.23320	-0.78900	10.10680	8.82970	HepG2	DNAJC21
RP11-1407O15.2	ENSG00000174093.6	421.13350	683.77430	-0.69920	9.77000	8.80890	HepG2	TRIM56
RP11-1407O15.2	ENSG00000174093.6	598.18530	907.77610	-0.60170	8.86990	7.78590	K562	DDX47
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-1407O15.2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36358796	36359042			36358841	36359042	36358298	36358395	0.16200	0.00005	0.00969	longer	HepG2	RBM22
A5SS	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36358796	36359042			36358841	36359042	36358298	36358395	0.17600	0.00042	0.00894	longer	K562	AQR
RI	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36361696	36365176			36361696	36361804	36365054	36365176	0.47500	0.00063	0.01760	included	HepG2	SRSF1
RI	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36361696	36365176			36361696	36361804	36365054	36365176	0.32100	0.00144	0.02673	included	HepG2	G3BP1
MXE	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36358124	36358158	36358298	36358395	36357157	36357272	36358796	36359042	0.13300	0.00207	0.01715	1included	K562	AQR
SE	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36367406	36367522			36365054	36365176	36375099	36375123	-0.12100	0.00257	0.05546	excluded	K562	RBM15
SE	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36367406	36367522			36365054	36365176	36375099	36375123	0.17000	0.00263	0.02753	included	K562	AQR
RI	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36361696	36365176			36361696	36361804	36365054	36365176	0.33100	0.00301	0.02898	included	HepG2	TAF15
MXE	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36361696	36361804	36365054	36365176	36358841	36359042	36375099	36375177	0.17300	0.00305	0.07129	1included	K562	RBM15
MXE	RP11-1407O15.2	ENSG00000174093.6	chr17	-	36361696	36361804	36365110	36365202	36358796	36359042	36375099	36375177	0.07700	0.00326	0.02515	1included	K562	AQR

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-1407O15.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-1407O15.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.

17 proteins are bound to RP11-1407O15.2 RNA:

eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.

97 RBPs can affect the gene expression of RP11-1407O15.2 :

The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-1407O15.2 :

The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not avaliable on ENCORE database.