RHOC

General Information

Gene Name : RHOC
Gene ID : ENSG00000155366.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RHOC)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RHOC	ENSG00000155366.16	199.54	228.52	214.03	ENCSR000AEF
HepG2	RHOC	ENSG00000155366.16	122.09	94.30	108.19	ENCSR985KAT
K562	RHOC	ENSG00000155366.16	243.07	231.61	237.34	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RHOC is not avaliable on ENCORE database.

Proteins bound to RNA

RHOC RNA is bound by 28 proteins.

CanvasJS.com

eCLIP assay for RHOC is not avaliable on ENCORE database.

28 proteins are bound to RHOC RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	113243988	113244028	-	3'-UTR,intron-Distal,intron-Proximal	4.68715	67.20332	K562	PABPC4
chr1	113244114	113244169	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.88725	54.10367	K562	PABPC4
chr1	113244060	113244114	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.75870	39.52575	K562	PABPC4
chr1	113246305	113246402	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.21509	36.35777	K562	PABPC4
chr1	113243897	113243979	-	3'-UTR,intron-Distal,intron-Proximal	3.97479	33.39906	K562	PABPC4
chr1	113248998	113249074	-	intron-Distal	6.88814	24.42756	K562	EIF4G2
chr1	113249648	113249689	-	5'-UTR,intron-Distal,intron-Proximal	5.88932	22.31003	K562	AQR
chr1	113243835	113243886	-	3'-UTR,intron-Distal,intron-Proximal	4.96525	21.70509	K562	PABPC4
chr1	113249139	113249207	-	intron-Distal	6.79187	20.92297	K562	EIF4G2
chr1	113249210	113249302	-	intron-Distal	5.51628	18.24765	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 87 entries

eCLIP assay for RHOC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RHOC is not available on ENCORE database.
160 RBPs can affect the levels of RHOC.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RHOC is not available on ENCORE database.

160 RBPs can affect the gene expression of RHOC :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RHOC	ENSG00000155366.12	4458.58090	1050.38930	2.08560	234.20250	231.51570	HepG2	ZNF622
RHOC	ENSG00000155366.12	4625.62430	1100.70590	2.07110	197.03030	194.12960	HepG2	ACO1
RHOC	ENSG00000155366.12	5333.73410	1416.23600	1.91300	143.69550	140.71620	HepG2	CELF1
RHOC	ENSG00000155366.12	3995.81800	880.27110	2.18240	93.15200	90.84420	HepG2	BOP1
RHOC	ENSG00000155366.12	3898.47600	1401.97090	1.47540	88.13380	85.35990	HepG2	AUH
RHOC	ENSG00000155366.12	2591.86180	955.05930	1.44020	79.77550	77.22260	HepG2	UPF1
RHOC	ENSG00000155366.12	2625.48050	1165.49580	1.17150	66.96410	64.64150	HepG2	SMN1
RHOC	ENSG00000155366.12	2475.91480	922.07970	1.42490	65.93040	63.62000	HepG2	UTP3
RHOC	ENSG00000155366.12	4266.86430	1519.55080	1.48940	63.92980	62.34620	HepG2	SRFBP1
RHOC	ENSG00000155366.12	3166.21640	1423.14870	1.15360	56.08180	53.79290	HepG2	SRSF5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 202 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RHOC is not available on ENCORE database.

23 RBPs can affect the splicing of RHOC :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	0.24300	0.00000	0.00001	included	HepG2	TBRG4
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	0.21900	0.00000	0.00033	included	K562	DROSHA
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	-0.26300	0.00000	0.00001	excluded	K562	SUPV3L1
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	-0.21700	0.00000	0.00056	excluded	K562	EFTUD2
SE	RHOC	ENSG00000155366.12	chr1	-	113247674	113247790	113246265	113246428	113249699	113249757	0.21000	0.00000	0.00096	included	K562	EIF3G
RI	RHOC	ENSG00000155366.12	chr1	-	113245184	113245741	113245184	113245315	113245620	113245741	0.05300	0.00000	0.00000	included	K562	AQR
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	-0.20800	0.00001	0.00578	excluded	K562	UCHL5
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247745	113246265	113246428	113249699	113249747	-0.21500	0.00002	0.05059	excluded	K562	NONO
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	-0.17200	0.00003	0.00259	excluded	HepG2	PCBP1
SE	RHOC	ENSG00000155366.12	chr1	-	113247721	113247790	113246265	113246428	113249699	113249755	-0.19200	0.00004	0.00260	excluded	K562	PRPF8

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RHOC

General Information

Functions

Localization

Domains (AlphaFold: RHOC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RHOC is not avaliable on ENCORE database.

28 proteins are bound to RHOC RNA:

eCLIP assay for RHOC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RHOC is not available on ENCORE database.

160 RBPs can affect the gene expression of RHOC :

The Knockdown/knockout RNA-Seq assay for RHOC is not available on ENCORE database.

23 RBPs can affect the splicing of RHOC :

The Knockdown/knockout RNA-Seq assay for RHOC is not avaliable on ENCORE database.