RBMX

General Information

Gene Name : RBMX
Gene ID : ENSG00000147274.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RBMX)

Not Available

Antibody Validation

View validation images for all RBMX antibodies

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RBMX	ENSG00000147274.14	308.68	290.42	299.55	ENCSR000AEF
HepG2	RBMX	ENSG00000147274.14	203.40	263.47	233.44	ENCSR985KAT
K562	RBMX	ENSG00000147274.14	385.77	414.11	399.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
RBMX		14794S	1			Submitted, ENCORE2	BGHcLV45-59, Submitted, ENCORE2	BGKcLV42-81, Submitted, ENCORE2
RBMX	ENCAB000AWS	ARP61802_P050	QC32540			Submitted, ENCORE2	BGHcLV45-59, Submitted, ENCORE2	BGKcLV42-81, Submitted, ENCORE2

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
RBMX	K562	CRISPR	RBMX-BGKcLV42-81,RBMX-BGKcLV42-82	NT-BGKcLV42-1,NT-BGKcLV42-2	56.6,68.4	Submitting	ENCORE2
RBMX	HepG2	CRISPR	BGHcLV45-57,BGHcLV45-58	BGHcLV45-1,BGHcLV45-2	96.5,98.0	NotSatisfied	ENCORE2
RBMX	HepG2	CRISPR	RBMX-BGHcLV45-59,RBMX-BGHcLV45-60	NT-BGHcLV45-1,NT-BGHcLV45-2	95.5,95.8	Submitting	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
RBMX	Product_ID: ARP61802_P050 Lot_ID: QC32540 Source: Aviva Target Name: RBMX-human
RBMX	Product_ID: 14794S Lot_ID: 1 Source: Cell Signaling Technology Target Name: RBMX-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RBMX is not avaliable on ENCORE database.

Proteins bound to RNA

RBMX RNA is bound by 46 proteins.

CanvasJS.com

eCLIP assay for RBMX is not avaliable on ENCORE database.

46 proteins are bound to RBMX RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	135962805	135962881	-	5'-UTR,intron-Distal	4.01991	400.00000	K562	DDX3X
chrX	135961387	135961413	-	intron-Distal,intron-Proximal	5.37917	400.00000	HepG2	DKC1
chrX	135961351	135961384	-	intron-Distal,intron-Proximal	5.07047	400.00000	K562	AATF
chrX	135961401	135961405	-	intron-Distal,intron-Proximal	5.87850	400.00000	HepG2	NOLC1
chrX	135961349	135961375	-	intron-Distal,intron-Proximal	4.29836	400.00000	K562	SMNDC1
chrX	135961375	135961385	-	intron-Distal,intron-Proximal	4.37035	400.00000	K562	SMNDC1
chrX	135961347	135961384	-	intron-Distal,intron-Proximal	4.39629	400.00000	HepG2	DKC1
chrX	135961405	135961432	-	intron-Distal,intron-Proximal	5.90810	400.00000	HepG2	NOLC1
chrX	135961368	135961384	-	intron-Distal,intron-Proximal	3.43360	400.00000	K562	PHF6
chrX	135961360	135961384	-	intron-Distal,intron-Proximal	3.36460	400.00000	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 139 entries

eCLIP assay for RBMX is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RBMX is not available on ENCORE database.
142 RBPs can affect the levels of RBMX.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RBMX is not available on ENCORE database.

142 RBPs can affect the gene expression of RBMX :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RBMX	ENSG00000147274.10	8962.83490	15204.29730	-0.76250	74.94510	72.02850	K562	NSUN2
RBMX	ENSG00000147274.10	3267.94360	5568.19730	-0.76880	45.15740	43.64210	HepG2	ZNF622
RBMX	ENSG00000147274.10	2195.39150	4741.45200	-1.11090	39.52830	38.04200	HepG2	TIAL1
RBMX	ENSG00000147274.10	1567.95470	4386.28570	-1.48410	39.27340	37.17640	HepG2	DDX21
RBMX	ENSG00000147274.10	2451.25390	5915.60190	-1.27100	38.09960	36.34120	HepG2	BOP1
RBMX	ENSG00000147274.10	4549.19720	8023.29460	-0.81860	37.91470	35.88310	HepG2	AUH
RBMX	ENSG00000147274.10	1891.07110	5454.15680	-1.52820	37.26250	35.25120	HepG2	EIF2S1
RBMX	ENSG00000147274.10	2286.08510	5875.04420	-1.36170	36.88990	35.00240	HepG2	HNRNPLL
RBMX	ENSG00000147274.10	2644.39210	6023.36070	-1.18760	35.06000	33.25480	HepG2	RPLP0
RBMX	ENSG00000147274.10	5658.65500	8696.20260	-0.61990	28.71120	27.53880	HepG2	SRFBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 172 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RBMX is not available on ENCORE database.

34 RBPs can affect the splicing of RBMX :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RBMX	ENSG00000147274.10	chrX	-	135957244	135957327	135954426	135954504	135957416	135957542	-0.06500	0.00000	excluded	K562	SF3B4
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957321	-0.15800	0.00005	excluded	K562	AKAP8L
SE	RBMX	ENSG00000147274.10	chrX	-	135960073	135960245	135958661	135958814	135961175	135961282	-0.05500	0.00013	excluded	HepG2	U2AF2
SE	RBMX	ENSG00000147274.10	chrX	-	135957629	135957744	135957416	135957542	135958661	135958814	-0.07500	0.00000	excluded	K562	AQR
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957327	0.29600	0.00000	included	K562	FXR1
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957449	-0.21600	0.00000	excluded	K562	SUPV3L1
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957344	-0.18400	0.00033	excluded	K562	NSUN2
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957344	-0.16100	0.00000	excluded	K562	HNRNPU
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957449	-0.14600	0.00009	excluded	K562	ZC3H8
SE	RBMX	ENSG00000147274.10	chrX	-	135955404	135955563	135954426	135954504	135957244	135957321	-0.20100	0.00000	excluded	K562	HNRNPK

Showing 1 to 10 of 81 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBMX

General Information

Functions

Localization

Domains (AlphaFold: RBMX)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RBMX is not avaliable on ENCORE database.

46 proteins are bound to RBMX RNA:

eCLIP assay for RBMX is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RBMX is not available on ENCORE database.

142 RBPs can affect the gene expression of RBMX :

The Knockdown/knockout RNA-Seq assay for RBMX is not available on ENCORE database.

34 RBPs can affect the splicing of RBMX :

The Knockdown/knockout RNA-Seq assay for RBMX is not avaliable on ENCORE database.