LLGL2

General Information

Gene Name : LLGL2
Gene ID : ENSG00000073350.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LLGL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LLGL2	ENSG00000073350.13	0.01	6.73	3.37	ENCSR000AEF
HepG2	LLGL2	ENSG00000073350.13	69.97	8.45	39.21	ENCSR985KAT
K562	LLGL2	ENSG00000073350.13	10.62	2.52	6.57	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LLGL2 is not avaliable on ENCORE database.

Proteins bound to RNA

LLGL2 RNA is bound by 20 proteins.

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eCLIP assay for LLGL2 is not avaliable on ENCORE database.

20 proteins are bound to LLGL2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	73564486	73564559	+	CDS,intron-Distal,intron-Proximal	5.84404	45.82226	HepG2	SF3A3
chr17	73559295	73559308	+	intron-Proximal	5.37421	23.15789	HepG2	SSB
chr17	73565349	73565407	+	5'-UTR,CDS,intron-Proximal	4.12266	22.71420	HepG2	PPIG
chr17	73559500	73559602	+	CDS,intron-Proximal	4.16495	22.20346	HepG2	PRPF8
chr17	73570379	73570458	+	intron-Distal,intron-Proximal	7.17535	20.05287	HepG2	EFTUD2
chr17	73566072	73566141	+	3'-UTR,CDS	4.24726	19.65082	HepG2	PPIG
chr17	73566504	73566557	+	3'-UTR,CDS	3.96141	18.84977	HepG2	PPIG
chr17	73559412	73559468	+	CDS	4.45861	17.58977	HepG2	PPIG
chr17	73567803	73567860	+	3'-UTR,CDS	4.88801	17.45473	HepG2	PPIG
chr17	73555440	73555491	+	CDS	3.95752	16.79588	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 78 entries

eCLIP assay for LLGL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LLGL2 is not available on ENCORE database.
108 RBPs can affect the levels of LLGL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LLGL2 is not available on ENCORE database.

108 RBPs can affect the gene expression of LLGL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LLGL2	ENSG00000073350.9	2458.72340	688.50390	1.83630	65.80180	63.38770	HepG2	PUF60
LLGL2	ENSG00000073350.9	1745.20300	773.11420	1.17450	46.64690	44.64670	HepG2	SUCLG1
LLGL2	ENSG00000073350.9	1643.74440	679.78770	1.27370	46.12380	44.01910	HepG2	SRSF5
LLGL2	ENSG00000073350.9	1460.56790	660.15150	1.14560	39.13330	37.15040	HepG2	SLBP
LLGL2	ENSG00000073350.9	1048.22880	403.27150	1.37800	36.86070	34.45140	HepG2	PPIL4
LLGL2	ENSG00000073350.9	1460.95680	730.86930	0.99910	34.22820	32.61510	HepG2	PUM1
LLGL2	ENSG00000073350.9	1575.30410	439.28720	1.84230	28.66020	27.36590	HepG2	TIAL1
LLGL2	ENSG00000073350.9	1423.20160	443.27060	1.68280	28.61410	27.04030	HepG2	TRIM56
LLGL2	ENSG00000073350.9	945.76960	469.53660	1.01020	25.10430	23.48220	HepG2	SMN1
LLGL2	ENSG00000073350.9	1203.30770	452.14130	1.41210	23.07470	21.45380	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 120 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LLGL2 is not available on ENCORE database.

12 RBPs can affect the splicing of LLGL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	LLGL2	ENSG00000073350.9	chr17	+	73560433	73560605	73560433	73560588	73564556	73564774	0.20000	0.00001	0.00231	longer	HepG2	SF3B4
RI	LLGL2	ENSG00000073350.9	chr17	+	73570533	73570749	73570533	73570576	73570690	73570749	0.17800	0.00002	0.00069	included	HepG2	PCBP1
A5SS	LLGL2	ENSG00000073350.9	chr17	+	73560433	73560605	73560433	73560588	73564556	73564774	0.21700	0.00005	0.01999	longer	HepG2	FUBP3
A5SS	LLGL2	ENSG00000073350.9	chr17	+	73560433	73560605	73560433	73560588	73564556	73564774	0.23900	0.00010	0.02066	longer	HepG2	AKAP1
A5SS	LLGL2	ENSG00000073350.9	chr17	+	73560433	73560605	73560433	73560588	73564556	73564774	0.22400	0.00011	0.01860	longer	HepG2	QKI
A5SS	LLGL2	ENSG00000073350.9	chr17	+	73560433	73560609	73560433	73560588	73564556	73564774	0.26700	0.00011	0.01363	longer	HepG2	U2AF1
RI	LLGL2	ENSG00000073350.9	chr17	+	73570293	73570749	73570293	73570341	73570533	73570749	0.16600	0.00020	0.00418	included	HepG2	PCBP1
RI	LLGL2	ENSG00000073350.9	chr17	+	73570293	73570749	73570293	73570341	73570533	73570749	0.21700	0.00028	0.00425	included	HepG2	TAF15
SE	LLGL2	ENSG00000073350.9	chr17	+	73547250	73547485	73539477	73539582	73552126	73552224	0.08400	0.00055	0.01240	included	HepG2	U2AF1
SE	LLGL2	ENSG00000073350.9	chr17	+	73567747	73567864	73567030	73567181	73567978	73568145	-0.07800	0.00063	0.01389	excluded	HepG2	U2AF1

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LLGL2

General Information

Functions

Localization

Domains (AlphaFold: LLGL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LLGL2 is not avaliable on ENCORE database.

20 proteins are bound to LLGL2 RNA:

eCLIP assay for LLGL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LLGL2 is not available on ENCORE database.

108 RBPs can affect the gene expression of LLGL2 :

The Knockdown/knockout RNA-Seq assay for LLGL2 is not available on ENCORE database.

12 RBPs can affect the splicing of LLGL2 :

The Knockdown/knockout RNA-Seq assay for LLGL2 is not avaliable on ENCORE database.