KIF20B

General Information

Gene Name : KIF20B
Gene ID : ENSG00000138182.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KIF20B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KIF20B	ENSG00000138182.14	29.46	25.53	27.50	ENCSR000AEF
HepG2	KIF20B	ENSG00000138182.14	8.75	23.18	15.96	ENCSR985KAT
K562	KIF20B	ENSG00000138182.14	18.15	21.68	19.91	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KIF20B is not avaliable on ENCORE database.

Proteins bound to RNA

KIF20B RNA is bound by 15 proteins.

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eCLIP assay for KIF20B is not avaliable on ENCORE database.

15 proteins are bound to KIF20B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	91498719	91498835	+	CDS	4.30497	12.39089	K562	ZNF622
chr10	91475105	91475231	+	intron-Distal	4.35614	7.90970	K562	KHSRP
chr10	91497951	91498028	+	CDS	4.58034	7.82199	HepG2	BCLAF1
chr10	91497165	91497274	+	CDS	3.18367	6.73967	K562	ZNF622
chr10	91470667	91470732	+	CDS,intron-Proximal	4.65948	6.59856	K562	SF3B4
chr10	91484835	91484909	+	CDS	3.78766	6.44455	K562	ZNF622
chr10	91497933	91498003	+	CDS	5.01506	6.23323	K562	UCHL5
chr10	91470939	91471096	+	intron-Distal,intron-Proximal	3.41153	6.18396	K562	KHSRP
chr10	91515181	91515375	+	intron-Distal	4.92612	6.17200	HepG2	PCBP2
chr10	91497322	91497359	+	CDS	4.82626	6.13315	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 44 entries

eCLIP assay for KIF20B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KIF20B is not available on ENCORE database.
154 RBPs can affect the levels of KIF20B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KIF20B is not available on ENCORE database.

154 RBPs can affect the gene expression of KIF20B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KIF20B	ENSG00000138182.10	206.06380	1419.23700	-2.78400	168.33930	165.98290	HepG2	ZNF622
KIF20B	ENSG00000138182.10	495.28760	1833.49190	-1.88830	89.08040	87.26270	HepG2	SRFBP1
KIF20B	ENSG00000138182.10	382.10040	2017.86100	-2.40080	86.65840	84.40670	HepG2	BOP1
KIF20B	ENSG00000138182.10	2153.05350	746.28250	1.52850	72.15200	70.49380	HepG2	SRSF1
KIF20B	ENSG00000138182.10	261.73020	1058.79000	-2.01630	61.42810	59.65450	HepG2	TIAL1
KIF20B	ENSG00000138182.10	421.44540	1290.43980	-1.61440	61.28530	58.95300	HepG2	UPF1
KIF20B	ENSG00000138182.10	490.21490	1953.33960	-1.99450	60.84110	58.29150	HepG2	TARDBP
KIF20B	ENSG00000138182.10	748.12050	1942.16410	-1.37630	53.69270	51.67240	HepG2	ETF1
KIF20B	ENSG00000138182.10	360.06640	1068.19120	-1.56880	52.66180	50.62170	HepG2	TRIM56
KIF20B	ENSG00000138182.10	555.69460	2004.00410	-1.85050	49.38600	47.24560	HepG2	HNRNPLL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 188 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KIF20B is not available on ENCORE database.

9 RBPs can affect the splicing of KIF20B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91486049	91486278			91486169	91486278	91484776	91484915	0.38500	0.00000	0.00000	longer	K562	U2AF2
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91465029	91465198			91465050	91465198	91461373	91461437	0.23100	0.00000	0.00000	longer	K562	AQR
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91483696	91483860			91483720	91483860	91479175	91479463	0.20700	0.00000	0.00000	longer	K562	AQR
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91486049	91486278			91486169	91486278	91484776	91484915	0.22000	0.00000	0.00033	longer	K562	U2AF1
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91486049	91486278			91486169	91486278	91484776	91484915	0.16400	0.00000	0.00112	longer	K562	RBM15
MXE	KIF20B	ENSG00000138182.10	chr10	+	91465029	91465198	91468923	91469010	91461373	91461437	91469101	91469218	0.28000	0.00000	0.00000	1included	K562	AQR
MXE	KIF20B	ENSG00000138182.10	chr10	+	91465029	91465198	91468829	91469010	91461373	91461437	91469101	91469218	0.29500	0.00000	0.00000	1included	K562	AQR
MXE	KIF20B	ENSG00000138182.10	chr10	+	91465029	91465198	91469683	91469822	91461373	91461437	91470717	91470902	0.24400	0.00000	0.00006	1included	K562	AQR
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91486049	91486278			91486169	91486278	91484776	91484915	0.14300	0.00001	0.00221	longer	K562	AKAP8L
A3SS	KIF20B	ENSG00000138182.10	chr10	+	91486049	91486278			91486169	91486278	91484776	91484915	0.14200	0.00002	0.00199	longer	K562	PUS1

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KIF20B

General Information

Functions

Localization

Domains (AlphaFold: KIF20B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KIF20B is not avaliable on ENCORE database.

15 proteins are bound to KIF20B RNA:

eCLIP assay for KIF20B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KIF20B is not available on ENCORE database.

154 RBPs can affect the gene expression of KIF20B :

The Knockdown/knockout RNA-Seq assay for KIF20B is not available on ENCORE database.

9 RBPs can affect the splicing of KIF20B :

The Knockdown/knockout RNA-Seq assay for KIF20B is not avaliable on ENCORE database.